Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06023 and RBAM_036340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:30
# Commandline: needle
# -asequence dna-align/BSNT_06023___yxiE.1.9828.seq
# -bsequence dna-align/RBAM_036340___yxiE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06023___yxiE-RBAM_036340___yxiE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06023___yxiE-RBAM_036340___yxiE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06023___yxiE
# 2: RBAM_036340___yxiE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 463
# Identity: 325/463 (70.2%)
# Similarity: 325/463 (70.2%)
# Gaps: 32/463 ( 6.9%)
# Score: 1071.0
#
#
#=======================================
BSNT_06023___ 1 ATGTTTAACAAAATGTTAGTAGCGATTGACGGATCAGACATGAGTGCA-- 48
||||||||.|||||..|.|.|||..|.|||||.|||||||||| |||
RBAM_036340__ 1 ATGTTTAAAAAAATTCTTGCAGCAGTAGACGGTTCAGACATGA--GCAAT 48
BSNT_06023___ 49 AAAGCGCTTGATGCCGCAGTGCATTTGGCAAAAGAGCAACAAGCGGAACT 98
|||||.||.||.||.||..|.|||.||||.|||||.||.||.||.|||||
RBAM_036340__ 49 AAAGCCCTGGACGCAGCGATCCATCTGGCGAAAGAACAGCAGGCTGAACT 98
BSNT_06023___ 99 AAGCATTCTTCATGTGGGGAGAGAAGCCGTCGTCACGACTTCTTCTCTGA 148
.|.||||||..|||.|||..|.||||||||.|||.|.||.||..||.|.|
RBAM_036340__ 99 CACCATTCTCTATGCGGGACGTGAAGCCGTTGTCTCCACATCAGCTTTAA 148
BSNT_06023___ 149 CGGGAATTGTCTATGTGCCTGAACACTTTATTGATGAAATCAGGAAC--G 196
|.||.|||||||||||.||.|||.||||.|||||.||.|||| ||| |
RBAM_036340__ 149 CCGGGATTGTCTATGTTCCGGAAAACTTCATTGAAGACATCA--AACATG 196
BSNT_06023___ 197 AGGT----TAAAAAAGAG-GGCCTGAAAATCCTTGAAAATGCAAAAGAAA 241
|.|| .|||||.||| |||| ||.||.|||.||||.||..|.|
RBAM_036340__ 197 AAGTCGAGCAAAAAGGAGCGGCC-----ATTCTGGAAGATGCCAAGCAGA 241
BSNT_06023___ 242 AAGCAGCCGAAAAAGGCGTTCAAGCTGAAACCATTTACG-CGAATGGCGA 290
||||.||.||||..||.||..|.||.||||.|.|.|||| |.|| |||||
RBAM_036340__ 242 AAGCGGCTGAAAGCGGAGTAAACGCGGAAAGCCTGTACGTCCAA-GGCGA 290
BSNT_06023___ 291 GCCGGCGCATGAGATACTAAATCACGCAAAAGAGAAAG----GC--GTCA 334
.||.||||||.|.||..|||| .|.||.||||| || .|||
RBAM_036340__ 291 ACCTGCGCATCAAATTTTAAA------CATAGCGAAAGAACAGCATTTCA 334
BSNT_06023___ 335 GCCTGATTGTAGTTGGCAGCCGGGGGATCAGCGGCCTGAAAGAAATGATG 384
..||||||||.||.||.|||||.||.||||||||..|.||||||||||||
RBAM_036340__ 335 ATCTGATTGTCGTCGGAAGCCGCGGAATCAGCGGATTTAAAGAAATGATG 384
BSNT_06023___ 385 CTTGGAAGCGTCAGCCATAAAGTGTCTCAATTATCAACATGCCCGGTTTT 434
||.||||||||.||||||||.||.||.|||||.||..|.||.||.||..|
RBAM_036340__ 385 CTCGGAAGCGTGAGCCATAAGGTCTCACAATTGTCTCCTTGTCCTGTACT 434
BSNT_06023___ 435 GATTGTTCGATAG 447
|||.||||..||.
RBAM_036340__ 435 GATCGTTCATTAA 447
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