Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05975 and RBAM_036150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:28
# Commandline: needle
# -asequence dna-align/BSNT_05975.1.9828.seq
# -bsequence dna-align/RBAM_036150.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05975-RBAM_036150.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05975-RBAM_036150.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05975
# 2: RBAM_036150
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 713
# Identity: 462/713 (64.8%)
# Similarity: 462/713 (64.8%)
# Gaps: 79/713 (11.1%)
# Score: 1411.5
#
#
#=======================================
BSNT_05975 1 ATG-AAATGGAAT--AAAA------------------------TGCTGAA 23
||| |||.||.|| |||| ||||||.
RBAM_036150 1 ATGAAAAAGGCATTCAAAATGATGGCAGCCGTGCTCTTAACCGTGCTGAC 50
BSNT_05975 24 AGCTGCGGGGATTGCAGTCTTGTTTTTTTC-CGTATT-AGCATATGCGGC 71
|||.|||..|.|.|.|| .|||| ||..|| |||..|.||.||
RBAM_036150 51 AGCCGCGCCGTTCGGAG--------GTTTCGCGCCTTCAGCCGAGGCCGC 92
BSNT_05975 72 CCCATCTTTAAAAGCAGTTCAAGCGAAAACACCGACTGTCAGCACCCATA 121
||| ||.||.|||..||| .|||||..|.|||||
RBAM_036150 93 -------------GCA----AACCGCAAAGCCCG-TTGTCAAAAGCCATA 124
BSNT_05975 122 CGTACAAAAAGATCAAGGAGTTAACGTATCCACAAGTGCATCACAT-CGG 170
||||.||..|..|.||..||.|.||||| ||.|.||..|| ||.|| |||
RBAM_036150 125 CGTATAAGCATGTAAAACAGCTGACGTA-CCCCGAGGTCA-CAAATACGG 172
BSNT_05975 171 G-AATGCCGCGTTTGAAAAGAAAATCAATCAAGAGCTGAAAGCCTACATT 219
| ||.||..|.||||||||||||||||||||.||..|.|||..|||.|||
RBAM_036150 173 GAAACGCATCTTTTGAAAAGAAAATCAATCAGGACTTCAAACGCTATATT 222
BSNT_05975 220 GAACAATCGTATCAGGAATATCTGAAAAACAAAAAAGCAGGCGAACAGCA 269
|||||||||||.||.||||||.|||||||||||||||..||.||..|.||
RBAM_036150 223 GAACAATCGTACCAAGAATATGTGAAAAACAAAAAAGACGGTGAGAAACA 272
BSNT_05975 270 GGGCTTTAAAACGGAATATCGAACATCCTTCAGCGTCAAATACAATGCGG 319
.||||..|||.|||||||.|.||||...||||..||.||.||.|||
RBAM_036150 273 AGGCTACAAAGCGGAATACCAAACAGATTTCAAGGTGAAGTATAAT---- 318
BSNT_05975 320 CA----GGCAAGCTCAGCATTCA-----AACACT-CAATTATATCTATTC 359
|| ||||||||||||||||| ||.||| ||.|||.| |
RBAM_036150 319 CAAGACGGCAAGCTCAGCATTCAGACGGAAGACTACAGTTACA------C 362
BSNT_05975 360 AGGCGGCGCCCACGGTTTAACGTCTGTCCAGTCCTTCAACTATGACTTGA 409
|||||||||.|||||..|.||.||.||.|||.||||.||.||.|||.||.
RBAM_036150 363 AGGCGGCGCACACGGGCTGACATCCGTTCAGACCTTTAATTACGACCTGG 412
BSNT_05975 410 AAGCACAAAAGCGGGTGACGCTGGAGCAGATTCTGAGCACCAAAACAAAA 459
..|||.||||.|||||.||.||.||..|..|.||||..||.|||||.|||
RBAM_036150 413 CCGCAAAAAAACGGGTCACACTCGATAATGTGCTGAATACAAAAACGAAA 462
BSNT_05975 460 GTCAGCAAAACGAGAGATTACCTATATAGCTATATCAAAAAACACGATGA 509
|..|.|||.||||||||.||.||.||..||||.|||||.|||||.||.||
RBAM_036150 463 GCTAACAAGACGAGAGACTATCTTTACGGCTACATCAAGAAACATGACGA 512
BSNT_05975 510 GCTGTTTTTCCCTGATGTAAAGAAAGAGGATATAACCCTAAACAAAGACA 559
.|||||....|..||.||.||.|||.|.||.||.|.|||.||.||.||.|
RBAM_036150 513 TCTGTTCGATCAGGACGTCAAAAAACAAGAGATCATCCTGAATAACGAAA 562
BSNT_05975 560 CAATGTTTTACTTTACGGCAAACGGAATCGCTATCGTCTTTGGCCAGTAT 609
.|...||.|.|||||||..||||||.||.||..|.||.||.||.||.|||
RBAM_036150 563 GACCTTTCTTCTTTACGAAAAACGGCATTGCCGTTGTGTTCGGACAATAT 612
BSNT_05975 610 GACTTGGGGCCTTATGCAGCGGGAATCCGGGATGTGCAGGTGCCAGCCTC 659
||..|.|||||.||.||.||.|||||||||||.||....||.||.||.||
RBAM_036150 613 GATCTCGGGCCGTACGCGGCAGGAATCCGGGACGTTTTCGTACCTGCATC 662
BSNT_05975 660 TATTTATCAATAA 672
..|.|||||||||
RBAM_036150 663 CGTCTATCAATAA 675
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