Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05890 and RBAM_035700
See
Amino acid alignment /
Visit
BSNT_05890 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:24
# Commandline: needle
# -asequence dna-align/BSNT_05890.1.9828.seq
# -bsequence dna-align/RBAM_035700.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05890-RBAM_035700.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05890-RBAM_035700.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05890
# 2: RBAM_035700
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity: 119/163 (73.0%)
# Similarity: 119/163 (73.0%)
# Gaps: 20/163 (12.3%)
# Score: 416.0
#
#
#=======================================
BSNT_05890 1 ------ATGCTGCAATTAATGAAAC-AGCTGTATGAAAA-ACCCGCTG-T 41
|||.|||||..|.|.|||| .||| |||||||| | |..|| |
RBAM_035700 1 TTGAATATGATGCAAAAATTAAAACGTGCT-TATGAAAATA--CATTGAT 47
BSNT_05890 42 CAAGTGGACATGTCATACAGGCTTTTATTTGATGATACTGCTT-GTTTTG 90
|||.|||||.|.||||||.|||||||||||..||||| || ||.|||
RBAM_035700 48 CAAATGGACGTTTCATACGGGCTTTTATTTTCTGATA----TTAGTATTG 93
BSNT_05890 91 ---TTTTTTATGTATGGTTTTCACACCGCGAATACCGGTTCATATATTTA 137
||||..||||||||.|||||.||.|||||||||||..|.||||||||
RBAM_035700 94 CTCTTTTGGATGTATGGATTTCATACAGCGAATACCGGCACTTATATTTA 143
BSNT_05890 138 TAACGATTTCTAA 150
.||||||||||||
RBAM_035700 144 CAACGATTTCTAA 156
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.