Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05887 and RBAM_035690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:24
# Commandline: needle
# -asequence dna-align/BSNT_05887___menA.1.9828.seq
# -bsequence dna-align/RBAM_035690___menA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05887___menA-RBAM_035690___menA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05887___menA-RBAM_035690___menA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05887___menA
# 2: RBAM_035690___menA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 949
# Identity: 728/949 (76.7%)
# Similarity: 728/949 (76.7%)
# Gaps: 77/949 ( 8.1%)
# Score: 2908.5
#
#
#=======================================
BSNT_05887___ 0 -------------------------------------------------- 0
RBAM_035690__ 1 ATGAATCAAAACAATATGGGGGGCAGCCAAAAGACGCCCGAGAAAGAAAG 50
BSNT_05887___ 1 -ATGGGGCAGATCCTTTGGCAGTTAACCCGTCCTCATACGTTAACCGCAT 49
|||||.|..||..|.||||||.|||||||.||||||||.||.||.||||
RBAM_035690__ 51 CATGGGCCGCATTTTGTGGCAGCTAACCCGCCCTCATACATTGACGGCAT 100
BSNT_05887___ 50 CGTTTGTGCCTGTGCTGCTCGGAACCGTTTTGGCGATGTTTTATGTGAAG 99
||||||||||.||.||.|||||.|||||.||||||||||||||.||.|||
RBAM_035690__ 101 CGTTTGTGCCCGTACTTCTCGGCACCGTATTGGCGATGTTTTACGTAAAG 150
BSNT_05887___ 100 GTTGATCTGCTGCTGTTTTTGGCTATGCTGTTTTCTTGCCTATGGATCCA 149
||||||.|.||||||||||||||.|||||||||||.|||||.||||||||
RBAM_035690__ 151 GTTGATTTCCTGCTGTTTTTGGCCATGCTGTTTTCCTGCCTTTGGATCCA 200
BSNT_05887___ 150 GATCGCGACGAACTTATTTAATGAATATTATGATTTTAAACGCGGATTAG 199
||||||.|||||||||||.|||||||||||.||||||||||||||.||||
RBAM_035690__ 201 GATCGCCACGAACTTATTCAATGAATATTACGATTTTAAACGCGGTTTAG 250
BSNT_05887___ 200 ATACAGCAGAATCAGTCGGAATCGGAGGGGCAATTGTACGCCACGGAATG 249
||||.|..||.||.|||||.|||||.||.||.||.||.||.|||||.|||
RBAM_035690__ 251 ATACGGAGGATTCCGTCGGTATCGGCGGAGCGATCGTCCGGCACGGCATG 300
BSNT_05887___ 250 AAGCCTAAAACGATTTTGCAATTAGCTCT-GGCATCATACGGGATTGCCA 298
|||||.|||||.|||.||||..|.||.|| ||| ||.||.|.|||||||.
RBAM_035690__ 301 AAGCCGAAAACAATTCTGCAGCTGGCGCTCGGC-TCTTATGCGATTGCCC 349
BSNT_05887___ 299 TTTTGCTCGGTGTCTATATTTGTGCGAGCAGCAGCTGGTGGCTTGC-GCT 347
|..||||||||||.|||||.||...||||||||||||||||||||| |||
RBAM_035690__ 350 TCGTGCTCGGTGTTTATATCTGCATGAGCAGCAGCTGGTGGCTTGCGGCT 399
BSNT_05887___ 348 GATCGGCCTTGTCGGCATGGCGATCGGCTACCTGTATACAGGCGGGCCGC 397
||||||||||.|||||||..|||||||||.||||||||.|||||.||||
RBAM_035690__ 400 -ATCGGCCTTGCCGGCATGCTGATCGGCTATCTGTATACGGGCGGCCCGC 448
BSNT_05887___ 398 TGCCGATTGCGTACACGCCGTTCGGTGAATTATTCTCAGGCATTTGCATG 447
|||||||||||||.||.||||||||.|||.|.|||||.||||||||||||
RBAM_035690__ 449 TGCCGATTGCGTATACACCGTTCGGGGAACTGTTCTCCGGCATTTGCATG 498
BSNT_05887___ 448 GGTTCGGTGTTTGTGCTGATTTCGTTTTTCATTCAGACAG-----ATATG 492
||.||.||.|||||.||.|||||.||.||||||||||||| || |.
RBAM_035690__ 499 GGCTCTGTATTTGTCCTTATTTCTTTCTTCATTCAGACAGGCAGAAT-TA 547
BSNT_05887___ 493 ATCAACACGCAAAGCATTTTGATTTCCATCCCGATTGCGATTCTT-GTCG 541
||.|| ||.|||||||||||||||||||||||.||.| |||| ||||
RBAM_035690__ 548 ATGAA----CAGAGCATTTTGATTTCCATCCCGATCGCCA-TCTTGGTCG 592
BSNT_05887___ 542 GCGCGATTAATTTGTCAAACAACATTCGCGATATTGAAGAGGACAAAAAA 591
|.||.||||||.||||.|||||.||.||.||||||||.||.||.|||||.
RBAM_035690__ 593 GAGCCATTAATCTGTCCAACAATATCCGTGATATTGAGGAAGATAAAAAG 642
BSNT_05887___ 592 GGCGGCCGCAAAACATTGGCGATTTTGATGGGGCATA-AGGGAGCTGTTA 640
|||||.||.|||||..||||.|||||||||||||||| |||| ||.||.|
RBAM_035690__ 643 GGCGGACGTAAAACCCTGGCCATTTTGATGGGGCATAGAGGG-GCCGTCA 691
BSNT_05887___ 641 CTCTGTTA---GCTGCGTCGTTTGCCGTCGCTTATATCTGGGTTGTCGG- 686
||.|| ||.||.||.||||||.|||||||.||||||.|.|||||
RBAM_035690__ 692 ---TGATACTGGCCGCATCTTTTGCCATCGCTTACATCTGGATCGTCGGT 738
BSNT_05887___ 687 CTTGGTTATTACCGGTGCCGCAAGCCCATGGCTGTTTGTCGTCTTTTTGA 736
||| ||.||.|..|||..|.|||||||.||||||||..|.|||||..|||
RBAM_035690__ 739 CTT-GTCATCATGGGTTACACAAGCCCGTGGCTGTTCCTGGTCTTCCTGA 787
BSNT_05887___ 737 GCGTGCCTAAGCCGGTTCAGGCAGTGAAGGGCTTCGTCCAAAAAGAAATG 786
|||||||.||.||.||||||||.|||||.|||||.||..||||.||||||
RBAM_035690__ 788 GCGTGCCGAAACCCGTTCAGGCCGTGAAAGGCTTTGTGAAAAACGAAATG 837
BSNT_05887___ 787 CCGATGAATATGATTGTCGCAATGAAATCAACAGCCCAAACAAATACATT 836
||||||||.||||||.|.||.|||||||||||.||.|||||.||||||||
RBAM_035690__ 838 CCGATGAACATGATTATTGCGATGAAATCAACGGCGCAAACCAATACATT 887
BSNT_05887___ 837 TTTCGGATTCCTGCTTTCGATCGGATTATTGATCAGCTATTTCCGATAA 885
||||||||||||||||||.||||||.|..|||||||.||||||||.|.|
RBAM_035690__ 888 TTTCGGATTCCTGCTTTCCATCGGACTCCTGATCAGTTATTTCCGCTGA 936
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