Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05846 and RBAM_035490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:22
# Commandline: needle
# -asequence dna-align/BSNT_05846.1.9828.seq
# -bsequence dna-align/RBAM_035490.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05846-RBAM_035490.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05846-RBAM_035490.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05846
# 2: RBAM_035490
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 169
# Identity: 118/169 (69.8%)
# Similarity: 118/169 (69.8%)
# Gaps: 17/169 (10.1%)
# Score: 401.0
#
#
#=======================================
BSNT_05846 1 ATGAAAACTCATGTTAAAAAAGATTTGGACAAAGGTTGGCATATGTTAAT 50
||||||||||||||.|..||||||.|.||..|||.||||||..|||||||
RBAM_035490 1 ATGAAAACTCATGTAATGAAAGATATAGATCAAGATTGGCAATTGTTAAT 50
BSNT_05846 51 TCAAGAAGCTAGATCCATTGGATTAGGCATTCATGATGTGAGGCAGTTTT 100
||||||.||||||..|||.||.||...||||.|.||||||||||..||.|
RBAM_035490 51 TCAAGAGGCTAGAATCATGGGTTTGCACATTGACGATGTGAGGCGCTTCT 100
BSNT_05846 101 TAGAAT-CTGAGACAGC-ATCGAGAAAGAAAAACCA--CAAAAAAACCGT 146
|| ||| ||||.|.||| .|..|||||.|||.|||| .|||||.|||.|
RBAM_035490 101 TA-AATACTGAAAAAGCGGTGAAGAAAAAAACACCAATGAAAAACACCAT 149
BSNT_05846 147 CCGGCAAGACTAG------ 159
||| |.||
RBAM_035490 150 CCG------CCAGCGGTAA 162
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