Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05842 and RBAM_035450
See
Amino acid alignment /
Visit
BSNT_05842 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:21
# Commandline: needle
# -asequence dna-align/BSNT_05842___galT.1.9828.seq
# -bsequence dna-align/RBAM_035450___galT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05842___galT-RBAM_035450___galT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05842___galT-RBAM_035450___galT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05842___galT
# 2: RBAM_035450___galT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1621
# Identity: 1101/1621 (67.9%)
# Similarity: 1101/1621 (67.9%)
# Gaps: 158/1621 ( 9.7%)
# Score: 3512.5
#
#
#=======================================
BSNT_05842___ 1 ATGAGTATTATTGA---ACATCTGGAACAGCTGCTTGA----GTATGGCC 43
||| |.| ||||| .||..|||||| |.||.| |||.||..
RBAM_035450__ 1 ATG-GCA--ATTGAGCGGCACGTGGAAC----GTTTAATCCGGTACGGAT 43
BSNT_05842___ 44 TGGAACGAAAATTGATTT-CGATCTGGGATCGGGAATATACGAGAAACCG 92
||.||..|.|..|||||| |.|||| .|||...|||||||||||||||||
RBAM_035450__ 44 TGCAAAAAGAGCTGATTTCCTATCT-TGATATTGAATATACGAGAAACCG 92
BSNT_05842___ 93 TCTTTATGAAGCGCTGGGCATCACACATCCCGAGCCGGTCTCCAGCAC-- 140
|.|.||||||||..||...|||||.|||||.|| ||| |.|||.||
RBAM_035450__ 93 TTTGTATGAAGCTTTGCATATCACCCATCCGGA---GGT-TTCAGAACAG 138
BSNT_05842___ 141 ----------------CAGCATCAAGCAGTCACAAAGCCTGCCGGACTTG 174
|.|||||| .||.|||||||.
RBAM_035450__ 139 AAAGAAAATGTATCGGCGGCATCA--------------TTGTCGGACTTA 174
BSNT_05842___ 175 CTAGCTCCCATCTATAAATGGGCTGCGGAAACCGGCCGAATGGAAGCGGA 224
.|.||.||.||.|||.|||||||.||.|||||.|||||.||.|.|||.||
RBAM_035450__ 175 TTGGCCCCGATTTATGAATGGGCGGCAGAAACGGGCCGGATTGCAGCCGA 224
BSNT_05842___ 225 TACAGATACGTACCGTGACCTGCTCAGCGCAAAGCTGATGGGCTGTTTTG 274
||||||.||.||.||.||||||||.|||||.|||.|.||||||||.||||
RBAM_035450__ 225 TACAGACACCTATCGCGACCTGCTGAGCGCGAAGATCATGGGCTGCTTTG 274
BSNT_05842___ 275 TGCCTGC-CCCGTCCGAG---GTCATTCGCAAATTTGAAGAGACAAAAGC 320
.||.|| .||||||||| |||..||| .||||||||.|||||.||
RBAM_035450__ 275 -CCCCGCAGCCGTCCGAGATTGTCCGTCG---TTTTGAAGAAACAAAGGC 320
BSNT_05842___ 321 ATTATACGGCCCAAAACAGGCGACAAAGGAATTCTATCAATATTCAGAGG 370
..|..||||.||..|.|||||||||||||..||.||.|.||.||||||||
RBAM_035450__ 321 GGTGCACGGACCGGAGCAGGCGACAAAGGCGTTTTACCGATTTTCAGAGG 370
BSNT_05842___ 371 ATGTCTATTATATACGGACTGACAGAATTGCCAAA----AATGTTCATTG 416
||||.||||||||.||..|.|||||||| ||| |||||....||
RBAM_035450__ 371 ATGTGTATTATATCCGTTCGGACAGAAT----AAAGCGGAATGTCGGGTG 416
BSNT_05842___ 417 GACGG-TGCCGACCGAATATGGCGAGCTGGAAATGACCATTAACCTATCA 465
||||| || .|||.|..||.||..|||||||.||.||.||.|||||.|||
RBAM_035450__ 417 GACGGCTG-AGACGGCTTACGGAAAGCTGGACATCACGATCAACCTTTCA 465
BSNT_05842___ 466 AAGCCTGAAAAGGACCCGAAAGCGATTGCGGCTGCAAAAGAGCAGGAACA 515
||.||.|||||.||.||||||||.|||||.|||||.|||||||||...||
RBAM_035450__ 466 AAACCGGAAAAAGATCCGAAAGCAATTGCCGCTGCCAAAGAGCAGCCTCA 515
BSNT_05842___ 516 GACAAATTATCC--GATGTGTTTGCTGTGTAAAGAAAATGTCGGCTTCGA 563
..|..||||||| |||||||| ||.|||||||||||||||||.|.|||
RBAM_035450__ 516 ATCCGATTATCCGAGATGTGTT--CTTTGTAAAGAAAATGTCGGGTACGA 563
BSNT_05842___ 564 GGGAAGCGTGAATCATCCAGCCCGGCAAAATCACAGAATCATTCCGGTCA 613
|||.||...|.||||.||.||.||.|||||.|...|..||||||||||.|
RBAM_035450__ 564 GGGGAGACCGGATCACCCGGCGCGTCAAAACCTTCGTGTCATTCCGGTAA 613
BSNT_05842___ 614 TCCTTGAGGACGAACAATGGTTCCTGCAATTCTCGCCATATGTCTATTAT 663
|.||.|..||.||.||.|||||.||||||||.||.||.|||||.|||||.
RBAM_035450__ 614 TTCTCGGCGATGAGCAGTGGTTTCTGCAATTTTCTCCGTATGTGTATTAC 663
BSNT_05842___ 664 CCGGAGCACTGCATTGTCTTAAAAGGTGAA----CATGAACCGATGGAGA 709
|.||||||.|||||.||.||.|||| | ||.|||||||||.|||
RBAM_035450__ 664 CGGGAGCATTGCATCGTTTTGAAAG----ACCGGCACGAACCGATGAAGA 709
BSNT_05842___ 710 TCAGCAAAAAAACATTTGGAAGGCTGCTGGCATTTCTTGGCCAATATCCG 759
||||.||||||||.||||...||||||||.|.||..|..||||.|||||.
RBAM_035450__ 710 TCAGTAAAAAAACGTTTGACCGGCTGCTGTCGTTCGTCAGCCAGTATCCT 759
BSNT_05842___ 760 CATTATTTTATCGGTTCAAACGCGGATCTGCCGATTGTCGGCGGCAGCAT 809
|||||||||.|||||||.||.||.|||||||||||||||||||||||.||
RBAM_035450__ 760 CATTATTTTCTCGGTTCCAATGCTGATCTGCCGATTGTCGGCGGCAGTAT 809
BSNT_05842___ 810 CCTAAGCCATGATCATTTCCAAGGCGGCGCGCATGATTTTCCAATGGCAC 859
..|||||||.||.|||||.||.||.|||....||||.||.||.|||||.|
RBAM_035450__ 810 TTTAAGCCACGACCATTTTCAGGGGGGCAATTATGAATTCCCGATGGCGC 859
BSNT_05842___ 860 GTGCAGA-AGCGGAAGACGTTTATGAATTAAA-------TGATTATCC-- 899
|.||.|| |..|.|||.|| .||.| |||.|||||
RBAM_035450__ 860 GGGCGGAGACAGAAAGCCG--------GTACAGGCTGCCTGACTATCCGA 901
BSNT_05842___ 900 ---CGGCGTGTCGCTGGGCTTAGTGAAGTGGCCGATGTCTGTGCTCAGGC 946
|||.|| ||||..|.|||||||||||||||||.||..||.|.|
RBAM_035450__ 902 AAACGGTGT-----TGGGAATTGTGAAGTGGCCGATGTCGGTCATCCGCC 946
BSNT_05842___ 947 TCCAAGGAGACGA-ACCGGGTCATG---TCGCCGAAGCTGCTGA--CCAT 990
|.|||.| ||| |..|.||| || |..|||..||.||.|| ||
RBAM_035450__ 947 TGCAAAG---CGAGAGTGCGTC-TGAGCTTTCCGGCGCGGCGGATGCC-- 990
BSNT_05842___ 991 ATCTTCCGCACGTGGCAGACG--TATTCCGATGAAAAAGCCGGC--ATTG 1036
|||.|.||..|.|||| .|| |||||||||| ||.|||| ||..
RBAM_035450__ 991 ATCCTGCGGGCATGGC--GCGGTTATTCCGATG----AGGCGGCTGATCT 1034
BSNT_05842___ 1037 C--CGCCTATACAGGCGATACGCCCCATAATACGGTCACACCGATTGCGC 1084
| |||.|.|.||||.||.||.||.||.|||||..|.||.||||||||.|
RBAM_035450__ 1035 CCTCGCGTGTTCAGGAGAAACACCGCACAATACAATTACGCCGATTGCCC 1084
BSNT_05842___ 1085 GGCGCAGGGGAGAC---TTGTACGAACTCGATATCGTACTGAGGAACAAC 1131
||| ||.||.|| ||.|.||||.|.|||.||||.||.||.||.|||
RBAM_035450__ 1085 GGC---GGAGAAACGGTTTATTCGAATTAGATCTCGTCCTCAGAAATAAC 1131
BSNT_05842___ 1132 CGGACGGATGAGGAGCATCCATTAGGAATATTTCATCCTCATCAAGAAGT 1181
||..|...|||.||||||||..|.|||||.||||||||.|||||.|||||
RBAM_035450__ 1132 CGCGCCTCTGATGAGCATCCGCTGGGAATTTTTCATCCCCATCAGGAAGT 1181
BSNT_05842___ 1182 CCACCATATTAAAAAAGAAAATATCGGCCTGATTGAGGTCATGGGATTGG 1231
.||.||..|.|||||||||||||||||.|||||||||||.|||||..|.|
RBAM_035450__ 1182 TCATCACCTGAAAAAAGAAAATATCGGACTGATTGAGGTAATGGGGCTTG 1231
BSNT_05842___ 1232 CGATATTGCCTGGCCGCTTACAGGAGGAAATGAAAGAAACGGCAGCGGCG 1281
||||..||||.||||||.|..|..|.|||||||||.|.|||||.|..|||
RBAM_035450__ 1232 CGATTCTGCCGGGCCGCCTTGAACAAGAAATGAAATACACGGCTGAAGCG 1281
BSNT_05842___ 1282 CTATGCTCTGCTGATCCAAAAACAGCCTTA---GAACAAAATCCGCTC-A 1327
||.|||||..|.||.||..||.|.|.|||| |.|.| ||..|| .
RBAM_035450__ 1282 CTGTGCTCACCGGACCCGGAAGCGGTCTTAACGGCAGA----CCTTTCTG 1327
BSNT_05842___ 1328 CGGCAAAGCATAGTGAATGGGCTCTTCGGATGATGGAAAA----AAGAAC 1373
||.|||||||||..||.|||||.||..|..||.||.|.|| |||
RBAM_035450__ 1328 CGTCAAAGCATAAAGATTGGGCGCTCAGTGTGCTGCATAAGCGGAAG--- 1374
BSNT_05842___ 1374 CATAACAAAAGAGAATGCAGATCTAG--TCATAAAAGAAGAGCTGGGACA 1421
.||||.|||||.||.||.||.| || || |.|||||.||..|.||.||
RBAM_035450__ 1375 -GTAACGAAAGAAAACGCGGAAC-AGATTC-TGAAAGAGGAAATCGGCCA 1421
BSNT_05842___ 1422 TGTATTCGCTCGCATTCTTGAACACGCCGGTGTATTTAAACAGACAGCAG 1471
||..||.||.||.||.||.||.||.|||||.||.||||||||.||||.||
RBAM_035450__ 1422 TGCCTTTGCGCGGATACTGGAGCATGCCGGCGTCTTTAAACAAACAGAAG 1471
BSNT_05842___ 1472 TGGGAAAACAGGCCTTCAGAAGGTTCATCGATCAGTTGGGCGCCAAACCA 1521
..||.|.|..|||.|||.|..||||.|||...||.||||||||...|||.
RBAM_035450__ 1472 AAGGCAGAGCGGCTTTCCGGCGGTTTATCCGCCATTTGGGCGCTCTACCG 1521
BSNT_05842___ 1522 GTCAAAAGCCTCAACCGCTAG 1542
|..|||||||.||.||..||.
RBAM_035450__ 1522 GAAAAAAGCCCCATCCCATAA 1542
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.