Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00522 and RBAM_035350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:16
# Commandline: needle
# -asequence dna-align/BSNT_00522.1.9828.seq
# -bsequence dna-align/RBAM_035350.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00522-RBAM_035350.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00522-RBAM_035350.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00522
# 2: RBAM_035350
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 815
# Identity: 759/815 (93.1%)
# Similarity: 759/815 (93.1%)
# Gaps: 16/815 ( 2.0%)
# Score: 3614.0
#
#
#=======================================
BSNT_00522 1 ------------ATGACCGTGCAGGATATCTGTATTCATTTAGGTATCTC 38
||||||||.|||||||||||||||||||||||||||||
RBAM_035350 1 TTGCACAGCACAATGACCGTACAGGATATCTGTATTCATTTAGGTATCTC 50
BSNT_00522 39 TCGCTCGTCTTATTATCGTTGGAAGAAGAATCTGAAGAAAGATCATCCCA 88
|||..||||||||||||||||||||||||||||||.|||.||||||||||
RBAM_035350 51 TCGAGCGTCTTATTATCGTTGGAAGAAGAATCTGATGAAGGATCATCCCA 100
BSNT_00522 89 AGCGCCATTTAGAAAAACAAATCGGCACGTTGTGCCGAGAGCACCAGTAT 138
||||||||||.|||||||||||||||||||||||||||||||||.|||||
RBAM_035350 101 AGCGCCATTTGGAAAAACAAATCGGCACGTTGTGCCGAGAGCACAAGTAT 150
BSNT_00522 139 CGATATGGATATCGAAAAATCACAGCTATATTAAAAAAGAGAATGTGTAT 188
||||||||||||||||||||||||||.|||.|||||||||||||||||||
RBAM_035350 151 CGATATGGATATCGAAAAATCACAGCCATACTAAAAAAGAGAATGTGTAT 200
BSNT_00522 189 TAACCATAAAACGGTTCAGCGTATTATGCAGAAAAATCAGTGGCAGTGCC 238
||||||||||||||||||.||||||||||||||.|||||.||||||||.|
RBAM_035350 201 TAACCATAAAACGGTTCAACGTATTATGCAGAAGAATCAATGGCAGTGTC 250
BSNT_00522 239 GGGTTAAGGTGAAAAAGCGCAAGAAGAATGGGCAGCCATATGCCGTGGTC 288
||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_035350 251 GGGTTAAGGTGAAAAAGCGCAAGAAGGATGGGCAGCCATATGCCGTGGTC 300
BSNT_00522 289 GACAATATATTAGATAGGAACTTTCAGTCTGATCATCCTCTTGAAAAACT 338
||.||||||||.|||.||||||||||||||||||.|||||||||||||||
RBAM_035350 301 GATAATATATTGGATCGGAACTTTCAGTCTGATCGTCCTCTTGAAAAACT 350
BSNT_00522 339 AGTAACAGACATCACGTATTTGCCTTATGGACAGAAACAATTGTACCTTT 388
||||||.||||||||.||||||||||||||||||||||||||||||||||
RBAM_035350 351 AGTAACGGACATCACATATTTGCCTTATGGACAGAAACAATTGTACCTTT 400
BSNT_00522 389 CCAGTATATTGGATGTATATAATGGAGAAGTGATTGCTTTTACGATTGGA 438
||||||||||.|||.||||.|||||||||||||||||||||||.|||||.
RBAM_035350 401 CCAGTATATTAGATTTATACAATGGAGAAGTGATTGCTTTTACTATTGGG 450
BSNT_00522 439 GATAAGCAGGACACAGACCTTGTCTTACACACACTTGATCAACTGCCAAC 488
||||||||||||||||.|.||||||||.|||||||||||||.||.||||.
RBAM_035350 451 GATAAGCAGGACACAGCCTTTGTCTTAGACACACTTGATCAGCTACCAAT 500
BSNT_00522 489 ACTGCCTGAGAACTGCGTGTTACATAGTGACCAAGGATCTGTGTATACAT 538
.|||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_035350 501 GCTGCCTGAGAACTGCGTGTTACATAGTGACCAAGGTTCTGTGTATACAT 550
BSNT_00522 539 CTTACGAGTATCAGAAAGCTGTTAAAACAAAAGGCATTACCATGAGCATG 588
|||||||||||||.||||||||||||||||||||||||||||||||||||
RBAM_035350 551 CTTACGAGTATCAAAAAGCTGTTAAAACAAAAGGCATTACCATGAGCATG 600
BSNT_00522 589 TCCCGCAAAGGGACACCCGCTGATAATGCCTCCATCGAATCGTTTCATTC 638
||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_035350 601 TCCCGCAAAGGGACGCCCGCTGATAATGCCTCCATCGAATCGTTTCATTC 650
BSNT_00522 639 CTCACTAAAGTCTGAAACGTTCTATCTTAACAGCATTGATCGAACCACGA 688
|||.|||||||||||||||||||||||||||||||||||||||||.||||
RBAM_035350 651 CTCGCTAAAGTCTGAAACGTTCTATCTTAACAGCATTGATCGAACTACGA 700
BSNT_00522 689 CCGCCATCGTAGAACGCACTGTCATAGAATAC--ATTCATTATTATAACA 736
|.|||||||||||||||||||||||||||||| || ||||||||||||
RBAM_035350 701 CTGCCATCGTAGAACGCACTGTCATAGAATACGAAT--ATTATTATAACA 748
BSNT_00522 737 ATATTCGTATTCAAACGAAACTAAACAACCAATCACCGATAAATTATCGG 786
||||||||||||||||.||||||||||||||||||||||||||.||||||
RBAM_035350 749 ATATTCGTATTCAAACCAAACTAAACAACCAATCACCGATAAACTATCGG 798
BSNT_00522 787 CAATTGGCTGTTTAA 801
|||||||||||||||
RBAM_035350 799 CAATTGGCTGTTTAA 813
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