Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05775 and RBAM_034930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:16
# Commandline: needle
# -asequence dna-align/BSNT_05775.1.9828.seq
# -bsequence dna-align/RBAM_034930___bacA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05775-RBAM_034930___bacA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05775-RBAM_034930___bacA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05775
# 2: RBAM_034930___bacA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 625
# Identity: 238/625 (38.1%)
# Similarity: 238/625 (38.1%)
# Gaps: 323/625 (51.7%)
# Score: 914.0
#
#
#=======================================
BSNT_05775 0 -------------------------------------------------- 0
RBAM_034930__ 1 TTGGTGCTCATGATTATATTGGATAATAGCATTCAAACAAAAAGCAAGGC 50
BSNT_05775 0 -------------------------------------------------- 0
RBAM_034930__ 51 TTATTCAATATCTAAACTGATTACGATCAACACGCTCGGTCCTGAAGGGA 100
BSNT_05775 0 -------------------------------------------------- 0
RBAM_034930__ 101 CAAGTAGTGAGTACGCAGCAAAAAACTTCATCACCAATTTTACCCTTCTC 150
BSNT_05775 0 -------------------------------------------------- 0
RBAM_034930__ 151 CAAGGGGTGAACAGCAAATTATCACTGCATGATACATTTGAATCGTGCAT 200
BSNT_05775 0 -------------------------------------------------- 0
RBAM_034930__ 201 TGAAAAAACGCTTCAAAGTCCGCTGGAATACACAATTGTGCCTCACGCGT 250
BSNT_05775 0 -------------------------------------------------- 0
RBAM_034930__ 251 ATGACGGCATTAAGCACTTCTACATGAGACCGGATCTGCAGCTTCTGCAA 300
BSNT_05775 1 ---------------------ATGTACGGCCTGGCTGTTCGTCCTGATTT 29
|||||||||||||||||.||.||.|.|||
RBAM_034930__ 301 ATTTTCAGGTGCGACACCCCGATGTACGGCCTGGCTGTCCGGCCCGGTTT 350
BSNT_05775 30 TGAATTCAGAGACGATATGCTTGATACATCTGTTATTGTTTCACATCCTT 79
|||||..|..||.||.||||||||||...||||.||.||.||.||.||.|
RBAM_034930__ 351 TGAATATACGGATGACATGCTTGATAAGACTGTCATCGTATCCCACCCGT 400
BSNT_05775 80 CACCTATTAATTTAATAAAATATTTTACCCGCAAAGATGT-TCGTTTCAA 128
|.|||||.|||||.||.||.|||||||||||.|||||||| .||||| .|
RBAM_034930__ 401 CTCCTATCAATTTGATTAAGTATTTTACCCGTAAAGATGTCACGTTT-GA 449
BSNT_05775 129 ACTAGTCAATTCAACCAGTCAAGCCGCAAGAAAAGTAAAAGAAGGTTTGT 178
.||.||.||.|||||.||...||||||.|.||.|||.||.||.|||||||
RBAM_034930__ 450 TCTGGTGAACTCAACGAGCGCAGCCGCGAAAAGAGTGAAGGACGGTTTGT 499
BSNT_05775 179 ATGACATTGCCTTAACCAATGAGCTTGCACGGCAAAAGTACGGGCTAACC 228
..|||||.||..|.||.||||||||.||..|.|||||||||||.||...|
RBAM_034930__ 500 CCGACATCGCGCTGACAAATGAGCTGGCCAGACAAAAGTACGGCCTTCAC 549
BSNT_05775 229 TTTGTAAAAACATTCAAAAGCATTCCAATGAGCTGGTCATTATTTGGAAA 278
|||||.||||||||.|||||||||||.|||||||||||||||||.|||||
RBAM_034930__ 550 TTTGTCAAAACATTTAAAAGCATTCCCATGAGCTGGTCATTATTCGGAAA 599
BSNT_05775 279 AGGAGACGTTGATGATGAAAACTAA 303
||||||..||.||||||||||||.|
RBAM_034930__ 600 AGGAGAGATTCATGATGAAAACTGA 624
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