Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05768 and RBAM_034880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:16
# Commandline: needle
# -asequence dna-align/BSNT_05768___ywfG.1.9828.seq
# -bsequence dna-align/RBAM_034880___ywfG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05768___ywfG-RBAM_034880___ywfG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05768___ywfG-RBAM_034880___ywfG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05768___ywfG
# 2: RBAM_034880___ywfG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1209
# Identity: 967/1209 (80.0%)
# Similarity: 967/1209 (80.0%)
# Gaps: 18/1209 ( 1.5%)
# Score: 3863.5
#
#
#=======================================
BSNT_05768___ 1 ATGGAAATAACACCGTCCGATGTCATCAAGACACTTCCAAGGCAAGAGTT 50
||||||||.|.|||||||||.|||||||||||||||||.|..||.||.||
RBAM_034880__ 1 ATGGAAATCATACCGTCCGACGTCATCAAGACACTTCCGAAACAGGAATT 50
BSNT_05768___ 51 TTCTCTCGTTTTTCAAAAGGTAAAGGAAATGGAAAAAACGGGGGCCCATA 100
|||.||||||||||||||||||||.||..||||.||||||||.|||||.|
RBAM_034880__ 51 TTCGCTCGTTTTTCAAAAGGTAAAAGAGTTGGAGAAAACGGGAGCCCAGA 100
BSNT_05768___ 101 TCATTAATCTCGGACAGGGGAACCCTGACCTTCCCACTCCGCCGCATATT 150
|||||||||||||.||||||||.||.||.||.|||||.|||||||||||.
RBAM_034880__ 101 TCATTAATCTCGGGCAGGGGAATCCCGATCTCCCCACACCGCCGCATATC 150
BSNT_05768___ 151 GTGGAGGCTTTGCGGGAGGCTTCTCTGAATCCTTCGTTTCATGGATACGG 200
||.||..|.||||||||||||.|.|||||||||||||.|||.||||||||
RBAM_034880__ 151 GTTGAAACATTGCGGGAGGCTGCGCTGAATCCTTCGTATCACGGATACGG 200
BSNT_05768___ 201 CCCTTTCAGGGGCTATCCTTTTTTAAAGGAAGCGATCGCTGCTTTCTATA 250
|||.|||||.||||||||.|||.|.||.|||||.|||||.|..||.|||.
RBAM_034880__ 201 CCCGTTCAGAGGCTATCCGTTTCTGAAAGAAGCCATCGCGGAATTTTATG 250
BSNT_05768___ 251 AAAGGGAATACGGAGTGACAATCAATCCTGAAACGGAGGTCGCGCTTTTC 300
|.||.||.|||||.||..|..|||||||.||.||.||.||||||||.|||
RBAM_034880__ 251 AGAGAGAGTACGGGGTATCGGTCAATCCGGAGACAGAAGTCGCGCTGTTC 300
BSNT_05768___ 301 GGAGGCGGGAAAGCCGGTTTGTATGTGTTGACACAATGCCTGCTCAATCC 350
||.||.||||||||.||||||||.||.|||||.|||||||||||.|||||
RBAM_034880__ 301 GGCGGAGGGAAAGCTGGTTTGTACGTTTTGACGCAATGCCTGCTGAATCC 350
BSNT_05768___ 351 GGGAGACATCGCTTTAGTCCCGAATCCAGGCTACCCTGAATATTTATCAG 400
.||.||.|||||.|||||||||||.||.|||||||||||.||||||||.|
RBAM_034880__ 351 CGGCGATATCGCCTTAGTCCCGAACCCCGGCTACCCTGAGTATTTATCGG 400
BSNT_05768___ 401 GGATTACGATGGCGCGAGCTGAGCTTTACGAAATGCCGCTGTATGAAGAA 450
|.|||||.|||||..||||.|||||..|.||.||||||||..||...|||
RBAM_034880__ 401 GCATTACAATGGCCAGAGCGGAGCTGCATGAGATGCCGCTTCATCCGGAA 450
BSNT_05768___ 451 AATGGCTATCTGCCGGATTTTGAAAAGATTGATCCAGCCGTGCTGGAAAA 500
||.||||||.|||||||||||||...|||||||||.|||||.|||.||||
RBAM_034880__ 451 AACGGCTATTTGCCGGATTTTGAGCGGATTGATCCCGCCGTCCTGAAAAA 500
BSNT_05768___ 501 AGCGAAGCTTATGTTTTTAAACTATCCGAACAATCCCACTGGAGCTGTGG 550
|||.|||||.||||||||.||.||.|||||.||.||.||.||.||....|
RBAM_034880__ 501 AGCCAAGCTGATGTTTTTGAATTACCCGAATAACCCGACGGGCGCGACTG 550
BSNT_05768___ 551 CTGATGCGGCTTTTTATGCAAGAGCTGCTGCTTTTGCGAAAGAGCATAAC 600
|.|||..|||.|||||||.||.|||.||.||.|||||.|||.|.|||.||
RBAM_034880__ 551 CAGATCAGGCGTTTTATGAAAAAGCGGCAGCGTTTGCAAAAAAACATGAC 600
BSNT_05768___ 601 ATCCATTTGATTCATGATTTTGCATACGGAGCGTTTGAATTCGATCAAAA 650
|||||..|.|||||.||||||||||||||.|||||.|||||.|||||.||
RBAM_034880__ 601 ATCCACCTTATTCACGATTTTGCATACGGCGCGTTCGAATTTGATCAGAA 650
BSNT_05768___ 651 ACCGGCCAGTTTTCTTGAGGCAGAGGATGCCAAAATTGTCGGAGCAGAGC 700
.||||||||.||||||.||||..|.||.||.||||..|||||.||.||||
RBAM_034880__ 651 CCCGGCCAGCTTTCTTCAGGCGAAAGAAGCGAAAACGGTCGGCGCGGAGC 700
BSNT_05768___ 701 TTTATTCATTTTCAAAAACATTTAACATGGCCGGCTGGAGAATGGCGTTT 750
|||||||||||||.|||||.||.||.|||||.||||||||||||||.|||
RBAM_034880__ 701 TTTATTCATTTTCGAAAACCTTCAATATGGCAGGCTGGAGAATGGCATTT 750
BSNT_05768___ 751 GCGGTTGGGAACGAAAGGATCATTCAGGCCGTCAATGAATTTCAGGATCA 800
||.||.|||||.||.|..|||||||||||.||||||||.|||||||||||
RBAM_034880__ 751 GCCGTGGGGAATGAGAAAATCATTCAGGCGGTCAATGAGTTTCAGGATCA 800
BSNT_05768___ 801 TGTATTTGTCGGCATGTTCGGCGGGCTGCAGCA---GGCAGCGAGTGCGG 847
.||.||.|||||||||||||||||.||.||||| ||||||| ||||
RBAM_034880__ 801 CGTCTTCGTCGGCATGTTCGGCGGCCTTCAGCAGGCGGCAGCG---GCGG 847
BSNT_05768___ 848 CGCTTTCTGGAGATCCGGAGCATACGGAATCGT-TGAAACGAATTTATAA 896
||||.||.|||.||||.|||||||||| |.||| ||||.||.|..|||||
RBAM_034880__ 848 CGCTGTCAGGAAATCCTGAGCATACGG-AGCGTCTGAAGCGCACATATAA 896
BSNT_05768___ 897 GGAACGAATTGACTTTTTTACGGCGCTTTGTGAAAAGGAATTGGGCTGGA 946
.|||||.|||||||||||.||||||.|.||||||||||||||.|||||||
RBAM_034880__ 897 AGAACGGATTGACTTTTTCACGGCGTTATGTGAAAAGGAATTAGGCTGGA 946
BSNT_05768___ 947 AGATGGAAAAGCCAAAAGGAACCTTTTACGTATGGGCTGAAATTCCGAAT 996
..||.|||||.||.|||||.||.|||||.|||||||||||||||||||||
RBAM_034880__ 947 GCATTGAAAAACCGAAAGGGACTTTTTATGTATGGGCTGAAATTCCGAAT 996
BSNT_05768___ 997 ACGTTTGAGACATCTCACCAATTTTCCGATTACTTGCTGGAGCATGCCCA 1046
...||.|||.|.||.|||||.|||||.||.||..||||||||||||||||
RBAM_034880__ 997 GAATTCGAGTCTTCACACCAGTTTTCGGACTATCTGCTGGAGCATGCCCA 1046
BSNT_05768___ 1047 TGTCGTAGTCACACCGGGCGAAATTTTTGGAAGCAACGGAAAAAGGCATG 1096
|||.||.||.||.||.|||||.|||||.||.|||..||||||..|..|||
RBAM_034880__ 1047 TGTTGTCGTGACGCCCGGCGAGATTTTCGGCAGCGGCGGAAAGCGTTATG 1096
BSNT_05768___ 1097 TCAGAATTTCAATGGTGTCGAAGCAGGAGGATCTGCGGGAATTTGTCACG 1146
|||||||.|||||||||.|.|||||||..|||.|..|||||||.||...|
RBAM_034880__ 1097 TCAGAATATCAATGGTGGCCAAGCAGGGCGATTTAAGGGAATTCGTGCTG 1146
BSNT_05768___ 1147 CGGATTCAAAAGCTGAACCTG-----CCGTTCGGGTCATTACAAGAAACA 1191
|||||||||||||| |.| ||.||| ..|||||||||||||||
RBAM_034880__ 1147 CGGATTCAAAAGCT----CGGTTTGTCCTTTC-CTTCATTACAAGAAACA 1191
BSNT_05768___ 1192 TCCCGCTAA 1200
|||||||.|
RBAM_034880__ 1192 TCCCGCTGA 1200
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