Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05763 and RBAM_034850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:15
# Commandline: needle
# -asequence dna-align/BSNT_05763___eutD.1.9828.seq
# -bsequence dna-align/RBAM_034850___eutD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05763___eutD-RBAM_034850___eutD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05763___eutD-RBAM_034850___eutD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05763___eutD
# 2: RBAM_034850___eutD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 973
# Identity: 822/973 (84.5%)
# Similarity: 822/973 (84.5%)
# Gaps: 2/973 ( 0.2%)
# Score: 3494.0
#
#
#=======================================
BSNT_05763___ 1 GTGGCAGATTTATTTTCAACAGTGCAAGAAAAAGTAGCTGGAAAAGACGT 50
|||||||||||||||.|||.|||.|||||||||||.||.||||||||.||
RBAM_034850__ 1 GTGGCAGATTTATTTACAAAAGTACAAGAAAAAGTCGCAGGAAAAGATGT 50
BSNT_05763___ 51 TAAAATTGTATTTCCTGAAGGCTTAGACGAGCGTATTTTAGAAGCGGTCA 100
.|||||.||||||||||||||.||.|||||.|||||..|.|..|||||||
RBAM_034850__ 51 GAAAATCGTATTTCCTGAAGGGTTGGACGAACGTATCCTGGTTGCGGTCA 100
BSNT_05763___ 101 GCAAGCTT-GCAGGAAACAAAGTGCTGAATCCGATTGTGATCGGCAATGA 149
.||| ||| ||.||.|||||.||..|.||.|||||.||..||||||||.|
RBAM_034850__ 101 ACAA-CTTGGCGGGCAACAAGGTATTAAAGCCGATCGTAGTCGGCAATAA 149
BSNT_05763___ 150 AAATGAGATCCAAGCAAAAGCAAAAGAATTGAACCTTACGCTGGACGGCG 199
|.|.||.||.|||||||||||.||||||||.||.||||||||.|||||||
RBAM_034850__ 150 AGAAGACATTCAAGCAAAAGCGAAAGAATTAAATCTTACGCTTGACGGCG 199
BSNT_05763___ 200 TTAAGATTTATGATCCTCATACATATGAAGGCATGGAAGACCTTGTACAA 249
|..|.||||.|||.||.|||||||||||||||||||||||.||.||.||.
RBAM_034850__ 200 TGGACATTTTTGACCCGCATACATATGAAGGCATGGAAGAACTCGTTCAG 249
BSNT_05763___ 250 GCATTCGTAGAACGCCGCAAAGGCAAAGCGACAGAAGAACAGGCTCGCAA 299
||.|||||||||||||||||||||||||||||.|||||||||||.|||||
RBAM_034850__ 250 GCTTTCGTAGAACGCCGCAAAGGCAAAGCGACGGAAGAACAGGCCCGCAA 299
BSNT_05763___ 300 AGCGTTATTAGACGAGAACTACTTCGGTACAATGCTGGTGTATAAAGGAC 349
|||.||..|.|||||.|||||.|||||.||.|||||.|||||.|||||.|
RBAM_034850__ 300 AGCTTTGCTGGACGAAAACTATTTCGGCACGATGCTTGTGTACAAAGGTC 349
BSNT_05763___ 350 TTGCAGACGGACTTGTAAGCGGAGCTGCTCACTCAACTGCTGACACTGTC 399
|.||||||||||||||.|||||||||||.||.||.||||||||.||.||.
RBAM_034850__ 350 TCGCAGACGGACTTGTCAGCGGAGCTGCACATTCTACTGCTGATACGGTG 399
BSNT_05763___ 400 CGCCCGGCTCTTCAAATCATCAAAACAAAAGAAGGCGTGAAAAAGACTTC 449
|||||.||.||.||||||||||||||||||||||||||||||||.||.||
RBAM_034850__ 400 CGCCCTGCACTGCAAATCATCAAAACAAAAGAAGGCGTGAAAAAAACATC 449
BSNT_05763___ 450 CGGCGTGTTCATCATGGCTCGCGGAGAAGAGCAATACGTATTCGCAGATT 499
.|||||.|||||||||||.|||||.||.|||||.||.||.|||||.||||
RBAM_034850__ 450 AGGCGTCTTCATCATGGCCCGCGGTGACGAGCAGTATGTGTTCGCTGATT 499
BSNT_05763___ 500 GCGCGATCAACATTGCGCCTGACAGCCAAGATCTTGCCGAGATTGCGATC 549
||||||||||||||||.|||||||||||.||.||||||||.||.||.||.
RBAM_034850__ 500 GCGCGATCAACATTGCTCCTGACAGCCAGGACCTTGCCGAAATCGCCATT 549
BSNT_05763___ 550 GAAAGTGCCAATACGGCAAAAATGTTCGACATTGAGCCTCGCGTGGCAAT 599
|||||.|||||||||||..|||||||.||||||||.||.|||||.||.||
RBAM_034850__ 550 GAAAGCGCCAATACGGCTCAAATGTTTGACATTGACCCGCGCGTTGCCAT 599
BSNT_05763___ 600 GCTCAGCTTCTCTACAAAAGGCTCAGCAAAATCTGATGAAACAGAAAAAG 649
|||||||||||||||||||||.||.||.|||||.||.||.||.||.||||
RBAM_034850__ 600 GCTCAGCTTCTCTACAAAAGGATCGGCGAAATCAGACGAGACGGACAAAG 649
BSNT_05763___ 650 TAGCGGATGCAGTGAAAATCGCGAAAGAAAAAGCGCCTGAACTGACACTT 699
|.||.||.||.||||||||.|||||.||||||||||||||.||.||.|||
RBAM_034850__ 650 TGGCTGAAGCCGTGAAAATTGCGAAGGAAAAAGCGCCTGAGCTTACGCTT 699
BSNT_05763___ 700 GACGGCGAATTCCAATTTGATGCTGCATTTGTTCCATCTGTAGCTGAGAA 749
|||||||||||||||||.||.|||||||||||.||.|||||.||.|||||
RBAM_034850__ 700 GACGGCGAATTCCAATTCGACGCTGCATTTGTGCCGTCTGTCGCGGAGAA 749
BSNT_05763___ 750 AAAAGCGCCGGATTCCGAAATCAAAGGGGACGCTAACGTATTCGTATTCC 799
||||||||||||.|||||.||.|||||.|||||.||.|||||.|||||||
RBAM_034850__ 750 AAAAGCGCCGGACTCCGACATTAAAGGAGACGCGAATGTATTTGTATTCC 799
BSNT_05763___ 800 CAAGCCTTGAAGCAGGAAACATCGGCTATAAAATCGCTCAGCGTTTGGGC 849
||||||||||||||||||||||||||||.||||||||||||||.||.|||
RBAM_034850__ 800 CAAGCCTTGAAGCAGGAAACATCGGCTACAAAATCGCTCAGCGCTTAGGC 849
BSNT_05763___ 850 AACTTTGAAGCGGTAGGTCCAATCCTGCAAGGTTTAAATATGCCTGTAAA 899
..||||||||||||.||.||.||.||||||||.|||||||||||||||||
RBAM_034850__ 850 GGCTTTGAAGCGGTCGGACCGATTCTGCAAGGATTAAATATGCCTGTAAA 899
BSNT_05763___ 900 CGACCTTTCAAGAGGATGTAACGCTGAAGATGTTTACAATCTCGCATTAA 949
|||.|||||.|||||||||||.||.|||||.||.||||||||.||.||||
RBAM_034850__ 900 CGATCTTTCTAGAGGATGTAATGCGGAAGACGTCTACAATCTTGCGTTAA 949
BSNT_05763___ 950 TTACAGCGGCGCAAGCACTGTAA 972
||||.||.||.|||||.||||||
RBAM_034850__ 950 TTACGGCTGCTCAAGCGCTGTAA 972
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