Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05750 and RBAM_034700

See Amino acid alignment / Visit BSNT_05750 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:15
# Commandline: needle
#    -asequence dna-align/BSNT_05750___ywgA.1.9828.seq
#    -bsequence dna-align/RBAM_034700___ywgA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05750___ywgA-RBAM_034700___ywgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05750___ywgA-RBAM_034700___ywgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05750___ywgA
# 2: RBAM_034700___ywgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity:     435/504 (86.3%)
# Similarity:   435/504 (86.3%)
# Gaps:           9/504 ( 1.8%)
# Score: 1894.0
# 
#
#=======================================

BSNT_05750___      1 TTGTTGAAAGAACATGCAAAACTGATGAAGGTGTTCTCGGATTCTGGAGA     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034700__      1 ---TTGAAAGAACATGCAAAACTGATGAAGGTGTTCTCGGATTCTGGAGA     47

BSNT_05750___     51 AATCATCGGGCGAAAGAAGCTGCAGAAAATGATTTATATCGCCAAGAAAA    100
                     ||||||||||||.||.||||||||||||||.|||||||||||.|||||||
RBAM_034700__     48 AATCATCGGGCGGAAAAAGCTGCAGAAAATCATTTATATCGCGAAGAAAA     97

BSNT_05750___    101 TGCAGTTTCCTTTCTATGAGAAATATGATTTTCACTTTTATGGACCGTAT    150
                     ||||||.|||||||||.||.||||||||||||||.|||||.||.||||||
RBAM_034700__     98 TGCAGTATCCTTTCTACGAAAAATATGATTTTCATTTTTACGGCCCGTAT    147

BSNT_05750___    151 TCGGAGGAACTGACGCTCCAGATTGAAGAGCTGTGCAACCTTGGATTTCT    200
                     ||.||.|||||||||||.|..|||||||||||||||||.|||||.|||||
RBAM_034700__    148 TCCGAAGAACTGACGCTTCGAATTGAAGAGCTGTGCAATCTTGGGTTTCT    197

BSNT_05750___    201 GCATGAGGTGAAGGAAAAAAAGGGCGGCTACTTTCAATACCGGTATTCGC    250
                     |.|||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_034700__    198 GGATGAGGTGAAGGAAAAAAAGGGCGGCTACTTTCAATACCGGTACTCGC    247

BSNT_05750___    251 TGACTGAGACAGGCTCCGCATTTTTAGACCATGCTGATCTGGAC-ATGCC    299
                     ||||.|||||.||..|||..||||||.|.|||||.||.|| .|| |||||
RBAM_034700__    248 TGACGGAGACGGGAGCCGAGTTTTTACATCATGCGGAGCT-TACGATGCC    296

BSNT_05750___    300 GGATATGA--AAGGCTATATCGACAGTGTAAACAGCCGTTCATCACGGTT    347
                     ||||||||  |||  ||.||||||||.||.||||||||.|||||.|||||
RBAM_034700__    297 GGATATGAAGAAG--TACATCGACAGCGTCAACAGCCGCTCATCCCGGTT    344

BSNT_05750___    348 TTTAGAGCTGGTTTCCACGATCCTTTACTTTGACGGGCTTGAGGATGAGG    397
                     |||.||||||||.||.|||||..|.||.||||||||.|||||.|.|||||
RBAM_034700__    345 TTTGGAGCTGGTGTCTACGATTTTGTATTTTGACGGCCTTGAAGCTGAGG    394

BSNT_05750___    398 AAAAGAAAGAAAAAGTCTTTACCATCAAAAGCAAGCAAAAATATACAAAT    447
                     ||||||||||.|||||.|||||.||.||||||||.||.||||||||..||
RBAM_034700__    395 AAAAGAAAGAGAAAGTGTTTACGATAAAAAGCAAACAGAAATATACGGAT    444

BSNT_05750___    448 GAAGAATATGACGAAGCGCTTCAATACATAGAGGAACTGAAGCAGATTTG    497
                     |||||||||||.||.||||||||.||||||||.||.|||||.||.|||||
RBAM_034700__    445 GAAGAATATGATGAGGCGCTTCACTACATAGAAGAGCTGAAACACATTTG    494

BSNT_05750___    498 TTAA    501
                     ||||
RBAM_034700__    495 TTAA    498


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