Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05740 and RBAM_034660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:15
# Commandline: needle
# -asequence dna-align/BSNT_05740___ywhC.1.9828.seq
# -bsequence dna-align/RBAM_034660___ywhC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05740___ywhC-RBAM_034660___ywhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05740___ywhC-RBAM_034660___ywhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05740___ywhC
# 2: RBAM_034660___ywhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 663
# Identity: 521/663 (78.6%)
# Similarity: 521/663 (78.6%)
# Gaps: 6/663 ( 0.9%)
# Score: 2020.0
#
#
#=======================================
BSNT_05740___ 1 TTGGACCGTTTTTTATATTATCCGTT--ATCTTTAATGCCATACCTCGTC 48
||||||.|.|||||||||||||||.| |.||| |||||.||..||||.
RBAM_034660__ 1 TTGGACAGATTTTTATATTATCCGCTGGAGCTT--ATGCCCTATGTCGTG 48
BSNT_05740___ 49 ATCACGCTAATTGTGTCGTTTACGATGCACGAGCTTGCCCACGCTTATGT 98
||.|||||.||||||.|.|||||||||||.||.||.||.|||||.|||||
RBAM_034660__ 49 ATTACGCTGATTGTGGCATTTACGATGCATGAACTGGCGCACGCGTATGT 98
BSNT_05740___ 99 CGCATACAAATTCGGTGACGATACGGCGAAAAAACAAGGAAGACTGACGC 148
|||.||....|||||.||||||||.|||...|..||.||.|||.|.||||
RBAM_034660__ 99 CGCGTATCGGTTCGGAGACGATACCGCGGCGAGGCAGGGCAGATTAACGC 148
BSNT_05740___ 149 TGAATCCCATTAAACACCTTGATCCGTTCGGAACCATTTTGATTCTGGTG 198
|.|||||.||||||||.||||||...||||||||.|||.|.|||.||||.
RBAM_034660__ 149 TCAATCCGATTAAACATCTTGATGTTTTCGGAACGATTCTAATTTTGGTC 198
BSNT_05740___ 199 GCCGGATTCGGGTGGGCGCGCCCCATTCCCGTGAATCGCCGTTTCTTTAA 248
||.||.|||||.|||||.||.||..|.||.|||||.|||||...||||||
RBAM_034660__ 199 GCGGGTTTCGGCTGGGCCCGTCCGGTGCCGGTGAACCGCCGCGCCTTTAA 248
BSNT_05740___ 249 GAAACCCCGGCTTGCTGGTGTGCTCGTATCTATAGCCGGGCCCGTCAGTA 298
.|.|||.|||||.||.||.|||||.||.||..|.||||||||.||.||.|
RBAM_034660__ 249 AAGACCGCGGCTGGCGGGAGTGCTGGTTTCCGTCGCCGGGCCTGTAAGCA 298
BSNT_05740___ 299 ACCTGATTCTTGCGTTTATTGGTTTCTTTTTGTTAGTGTTGATGCATGCG 348
|||||.|||||||.|||||.||||||||||||.||||||||||||||||.
RBAM_034660__ 299 ACCTGCTTCTTGCCTTTATCGGTTTCTTTTTGCTAGTGTTGATGCATGCT 348
BSNT_05740___ 349 TACGGAATGGAAATGCTTGCGGCGTTCAGCACGGGGCTGGATCAGTTTTT 398
|||||||||||..|||||.|.||.|||||||.||||||.||.|..|||||
RBAM_034660__ 349 TACGGAATGGAGCTGCTTTCTGCATTCAGCATGGGGCTTGACCGCTTTTT 398
BSNT_05740___ 399 TTCTATTTGGATACAGCTGAATCTTG-TCTTGTTTTTATTTAATCTGCTG 447
.|||||||||||.||||||||||||| .||| |.||||||.||.||||||
RBAM_034660__ 399 CTCTATTTGGATTCAGCTGAATCTTGCGCTT-TGTTTATTCAACCTGCTG 447
BSNT_05740___ 448 CCGCTTCCTCCGCTCGATGGCTATCGAATTATAGAAGATCTCGTTCCGCC 497
||||||||||||||.||.|||||.||.|||||.||.||||||||.|||||
RBAM_034660__ 448 CCGCTTCCTCCGCTTGACGGCTACCGGATTATTGAGGATCTCGTGCCGCC 497
BSNT_05740___ 498 GGGCGTGCGTGCCAAAATGACGCAGGCGGAGAGCTACGGCTTTATCGTAT 547
|||.|||||.|||||||||||.|||...|||||||||||..|||||||.|
RBAM_034660__ 498 GGGGGTGCGCGCCAAAATGACTCAGTTTGAGAGCTACGGGATTATCGTGT 547
BSNT_05740___ 548 TTTTGGTGCTGTTTGTGACACCGCTAGGATCTTACGTGCTGTGGCCGATG 597
||.|.||||||||||||||||||.|.||.||.||.||..||||||||.||
RBAM_034660__ 548 TTCTCGTGCTGTTTGTGACACCGGTCGGCTCCTATGTCGTGTGGCCGCTG 597
BSNT_05740___ 598 CTCAATGCAGGAAGAGATTCGATTTTAAAGCTGTTTTCAGCGATATTTCA 647
.|.|..|..||.|||||.|.||||.|.|||.|.|||.|....||||||||
RBAM_034660__ 598 TTAAGCGAGGGGAGAGACTGGATTCTCAAGGTATTTGCCATTATATTTCA 647
BSNT_05740___ 648 ACCGCTTTTGTAG 660
|||||||||||||
RBAM_034660__ 648 ACCGCTTTTGTAG 660
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