Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05733 and RBAM_034620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence dna-align/BSNT_05733___speE.1.9828.seq
# -bsequence dna-align/RBAM_034620___speE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05733___speE-RBAM_034620___speE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05733___speE-RBAM_034620___speE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05733___speE
# 2: RBAM_034620___speE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 833
# Identity: 704/833 (84.5%)
# Similarity: 704/833 (84.5%)
# Gaps: 4/833 ( 0.5%)
# Score: 2980.0
#
#
#=======================================
BSNT_05733___ 1 TTGAGCGAACTTTGGTACACAGAGAAGCAGACGAAAAACTTTGGCATTAC 50
||||||||.||||||||.||.||||||||||||||.||.||.||||||||
RBAM_034620__ 1 TTGAGCGAGCTTTGGTATACGGAGAAGCAGACGAAGAATTTCGGCATTAC 50
BSNT_05733___ 51 GATGAAGGT-TAACAAGACGTTACATACAGAACAAACGGAGTTTCAGCAT 99
..|.||||| .||||| ||.||||||||.|||||.|||||.|||||||||
RBAM_034620__ 51 ATTAAAGGTGAAACAA-ACATTACATACGGAACAGACGGAATTTCAGCAT 99
BSNT_05733___ 100 TTAGAAATGGTGGAAACAGAAGAGTTCGGCAACATGCTGTTTTTGGACGG 149
.|.|||||||||||.||||||||.|||||||||||||||||.||.|||||
RBAM_034620__ 100 CTGGAAATGGTGGAGACAGAAGAATTCGGCAACATGCTGTTCTTAGACGG 149
BSNT_05733___ 150 CATGGTGATGACATCTGAAAAAGACGAATTCGTTTATCACGAAATGGTGG 199
.|||||.|||||.|||||||||||||||||.||.|||||.||||||||.|
RBAM_034620__ 150 AATGGTCATGACTTCTGAAAAAGACGAATTTGTCTATCATGAAATGGTTG 199
BSNT_05733___ 200 CGCATGTGCCATTATTTACGCACCCAAATCCGGAGCACGTTCTTGTAGTC 249
||||.||.||.||||||||||||||.||||||||..||||.||.||.|||
RBAM_034620__ 200 CGCACGTCCCGTTATTTACGCACCCGAATCCGGAAAACGTCCTCGTTGTC 249
BSNT_05733___ 250 GGCGGCGGTGACGGCGGCGTTATCAGAGAAATCCTGAAGCACCCAAGCGT 299
||||||||.||||||||.||.||||||||.||.|||||||||||||||||
RBAM_034620__ 250 GGCGGCGGAGACGGCGGTGTCATCAGAGAGATTCTGAAGCACCCAAGCGT 299
BSNT_05733___ 300 GAAAAAAGCGACACTTGTAGACATTGACGGCAAGGTGATCGAATACTCTA 349
.|||||||||||.|||||.|||||||||||||||||.||.||||||||||
RBAM_034620__ 300 AAAAAAAGCGACGCTTGTCGACATTGACGGCAAGGTTATTGAATACTCTA 349
BSNT_05733___ 350 AAAAGTTCCTTCCTTCTATCGCAGGCAAACTGGATGATCCGCGCGTTGAC 399
||||.||||||||.||.||.||.|||||.||.||||||||||||||.|||
RBAM_034620__ 350 AAAAATTCCTTCCGTCCATTGCGGGCAAGCTTGATGATCCGCGCGTCGAC 399
BSNT_05733___ 400 GTGCAG-GTAGATGACGGATTTATGCACATTGCAAAATCTGAAAATCAAT 448
||| || ||.||||||||.||.||||||||.||.|||||.||.|||.|.|
RBAM_034620__ 400 GTG-AGAGTCGATGACGGTTTCATGCACATCGCGAAATCAGAGAATGAGT 448
BSNT_05733___ 449 ATGACGTCATCATGGTAGATTCGACTGAACCAGTCGGACCGGCTGTAAAC 498
||||||||||||||||.|||||.||.|||||.|||||||||||.||.||.
RBAM_034620__ 449 ATGACGTCATCATGGTTGATTCAACAGAACCGGTCGGACCGGCCGTCAAT 498
BSNT_05733___ 499 CTGTTTACAAAAGGATTCTACGCAGGAATCGCTAAAGCGCTGAAAGAAGA 548
|||||..|||||||.|||||.||.|||||..|.||.|||.|.||||||||
RBAM_034620__ 499 CTGTTCTCAAAAGGCTTCTATGCCGGAATTTCCAAGGCGTTAAAAGAAGA 548
BSNT_05733___ 549 CGGCATTTTTGTCGCACAGACGGACAACCCATGGTTTACACCGGAATTAA 598
||||||.||.|||||.||||||||||||||.||||||||||||||..|.|
RBAM_034620__ 549 CGGCATCTTCGTCGCGCAGACGGACAACCCGTGGTTTACACCGGAGCTGA 598
BSNT_05733___ 599 TCACAAATGTACAGCGCGACGTGAAGGAAATCTTCCCGATTACGAAGCTG 648
|.|||||.||||||||.||||||||.||||||||||||||.||....|||
RBAM_034620__ 599 TTACAAACGTACAGCGTGACGTGAAAGAAATCTTCCCGATCACCCGCCTG 648
BSNT_05733___ 649 TATACGGCGAACATTCCGACATATCCAAGCGGTTTGTGGACATTTACAAT 698
||||||||.||.||.|||||.||.||||||||.||||||||||||||.||
RBAM_034620__ 649 TATACGGCTAATATCCCGACGTACCCAAGCGGCTTGTGGACATTTACGAT 698
BSNT_05733___ 699 TGGCTCGAAAAAATATGATCCGCTTGCAGTGGAAGACAGCCGTTTCTTCG 748
.||.||.|||||.||.||||||||||.||||||.||||||||||||||.|
RBAM_034620__ 699 CGGTTCTAAAAAGTACGATCCGCTTGAAGTGGAGGACAGCCGTTTCTTTG 748
BSNT_05733___ 749 ATATTGAGACGAAATATTACACAAAAGATATTCATAAAGCGGCGTTTGTT 798
|.||.||.||||||||||||||.|||||..||||.||||||||.||||||
RBAM_034620__ 749 ACATCGACACGAAATATTACACGAAAGAGCTTCACAAAGCGGCATTTGTT 798
BSNT_05733___ 799 CTGCCGAAATTTGTGAGTGACCTGATTAAATAA 831
||.||||||||||||||.|||.|.||.||||||
RBAM_034620__ 799 CTTCCGAAATTTGTGAGCGACTTAATCAAATAA 831
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