Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05725 and RBAM_034510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence dna-align/BSNT_05725___ywhL.1.9828.seq
# -bsequence dna-align/RBAM_034510___ywhL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05725___ywhL-RBAM_034510___ywhL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05725___ywhL-RBAM_034510___ywhL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05725___ywhL
# 2: RBAM_034510___ywhL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1377
# Identity: 1277/1377 (92.7%)
# Similarity: 1277/1377 (92.7%)
# Gaps: 0/1377 ( 0.0%)
# Score: 5985.0
#
#
#=======================================
BSNT_05725___ 1 ATGAAAAAGAATGATCTTTCTGCTTTACAGGAAAATTGTTTCTGTTTTTG 50
|||||||||||||||||.||||||||||||||||||||||||||||||||
RBAM_034510__ 1 ATGAAAAAGAATGATCTGTCTGCTTTACAGGAAAATTGTTTCTGTTTTTG 50
BSNT_05725___ 51 TGATGAGGAAATTAGCCGGGAAGCGCCGTTTCAAGTGCCGATAGATATCC 100
||||||||||||||||.|.|||||||||||||||||||||||.||.||.|
RBAM_034510__ 51 TGATGAGGAAATTAGCAGAGAAGCGCCGTTTCAAGTGCCGATTGACATTC 100
BSNT_05725___ 101 CTGAGGGCTTCAAGGTTGATTCGGCAGAAGCGTCAGCGGCTGTTACATGG 150
|.|||||.||||...|||||||.||.|||||..|.|||.|.|||||||||
RBAM_034510__ 101 CCGAGGGGTTCACCATTGATTCTGCCGAAGCAGCTGCGACGGTTACATGG 150
BSNT_05725___ 151 AGTACAGACAATTTGTCCTGTATCAGTGAGCCTTGCTTAATCCAGACTGG 200
|||||.||..||||.|..||||||||||||||||||||||||||||||||
RBAM_034510__ 151 AGTACTGATCATTTATTATGTATCAGTGAGCCTTGCTTAATCCAGACTGG 200
BSNT_05725___ 201 GCCGGAACCAGAAGATATCGGTGTTCGATATGCTGTGAGAGTACAAGGGA 250
|||||||||||||||||||||||||||||||||.|||||||||.||||||
RBAM_034510__ 201 GCCGGAACCAGAAGATATCGGTGTTCGATATGCCGTGAGAGTAAAAGGGA 250
BSNT_05725___ 251 CCATTACGCTTCTTGTCAGTGTGTCGCCTGTACGAAATCAATATGGACAA 300
||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034510__ 251 CCGTTACGCTTCTTGTCAGTGTGTCGCCTGTACGAAATCAATATGGACAA 300
BSNT_05725___ 301 GGAGACGGGGCTGTTTCGGTGATTCATACCGAAGAGATTGATCAAGTTGT 350
||.||||||.|||||||.|||||||||||.||||||||||||||||||||
RBAM_034510__ 301 GGGGACGGGTCTGTTTCTGTGATTCATACTGAAGAGATTGATCAAGTTGT 350
BSNT_05725___ 351 TTATTATGCAGCACAGTCTGACCGCTGTCCTGATTTTAGTCAAATGACAG 400
||||||||||||.|||||||.|||||||||||||||.||||||||.||.|
RBAM_034510__ 351 TTATTATGCAGCGCAGTCTGGCCGCTGTCCTGATTTCAGTCAAATAACGG 400
BSNT_05725___ 401 TGGAAGATCTTCTCATTGTACCGCCTTTCTACGGCAGTCCGCTTACGGTG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034510__ 401 TGGAAGATCTTCTCATTGTACCGCCTTTCTACGGCAGTCCGCTTACGGTG 450
BSNT_05725___ 451 GCCGGGACACTTGTTTTACCGCCATCGCCAGACCCTCAATCATATGTGTT 500
.|||||||||||||||||||||||.||||||||||||||||.||||||||
RBAM_034510__ 451 ACCGGGACACTTGTTTTACCGCCACCGCCAGACCCTCAATCGTATGTGTT 500
BSNT_05725___ 501 TACTGCCAATACTGGAGACAGCACGGTTTCGGTCATTGATGCAGATTTAA 550
|||.||||||.|.||||||||||||||||||||.||||||.|||||||||
RBAM_034510__ 501 TACAGCCAATTCAGGAGACAGCACGGTTTCGGTTATTGATTCAGATTTAA 550
BSNT_05725___ 551 ACACTGTTGTAAAAACAATCCCGTTTTCTGCTGTGCCAACTAATCTAGGC 600
||||||||||||||||||||||.|||||||..||||||||||||.|||||
RBAM_034510__ 551 ACACTGTTGTAAAAACAATCCCTTTTTCTGACGTGCCAACTAATTTAGGC 600
BSNT_05725___ 601 GTTACTTTCGATAAAGCATTCACGTATATCCTCCATGGAAATACCAACCT 650
|||||||||||||||||.|||||||||.||||||||||.|||||||||||
RBAM_034510__ 601 GTTACTTTCGATAAAGCTTTCACGTATGTCCTCCATGGGAATACCAACCT 650
BSNT_05725___ 651 TGTCTCAGTGATTGATAATAAAACATTAACTATCATAAATACCATTACTG 700
||||||||||.|.|||||||||||||||||.||||||||||||||.||||
RBAM_034510__ 651 TGTCTCAGTGCTAGATAATAAAACATTAACCATCATAAATACCATCACTG 700
BSNT_05725___ 701 TTGGAGGAGGGCCGAGAAAAATCGAATTTGATCCAACAGATGAGTTCGCA 750
|||||||||||||||||||..|.|||||||||.||||||||||||||||.
RBAM_034510__ 701 TTGGAGGAGGGCCGAGAAAGGTTGAATTTGATTCAACAGATGAGTTCGCG 750
BSNT_05725___ 751 TACGTGATGGCCGCCGGATCTATATATGTGATTAACACGGCCTCTCAATC 800
|||||||||||||||||||||||||||.||||.||||.||||||||||||
RBAM_034510__ 751 TACGTGATGGCCGCCGGATCTATATATATGATCAACATGGCCTCTCAATC 800
BSNT_05725___ 801 GGTCATTGATGTCATTCCGATACCCGGCGCTTTAGACTTTGCTCTTGATC 850
||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_034510__ 801 GGTCGTTGATGTCATTCCGATACCCGGCGCTTTAGACTTTGCTCTTGATC 850
BSNT_05725___ 851 CGAATGGACAGTATGTCTATACCGCTAATGGAAGCAGTTGGTCGGTTGAT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034510__ 851 CGAATGGACAGTATGTCTATACCGCTAATGGAAGCAGTTGGTCGGTTGAT 900
BSNT_05725___ 901 AAATATGATGTAAATACTGGGCAGTTGGTAGAAAGTATCATAGATTCATT 950
|||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_034510__ 901 AAATATGATGTAAATACTGGGCAGTTGGTAGAAAGTATCATAGATACATT 950
BSNT_05725___ 951 TGAATTTCCCAGTTTAATTGCAACTCCTTACGCTGGAAATTTTGCGTACG 1000
|||||||||||||||||||||.||||||||||||||||||||||||||.|
RBAM_034510__ 951 TGAATTTCCCAGTTTAATTGCCACTCCTTACGCTGGAAATTTTGCGTATG 1000
BSNT_05725___ 1001 TGTTGAATGGTGAGTTGTGGCCGAAAGGTGTAACGGAGATTAGTTTGTCT 1050
||||||||||||||.||..||||||||||||||||||||||||||||||.
RBAM_034510__ 1001 TGTTGAATGGTGAGCTGCTGCCGAAAGGTGTAACGGAGATTAGTTTGTCA 1050
BSNT_05725___ 1051 CCATTAAGCAGGGGAGGGGACTTCAGCCGTTTATTTGAAACGCTGATGAC 1100
|||||||||||||||||.|||||||.||||||||||||||||||||.|||
RBAM_034510__ 1051 CCATTAAGCAGGGGAGGCGACTTCAACCGTTTATTTGAAACGCTGAGGAC 1100
BSNT_05725___ 1101 GATTGTATTTTCTCTCGATAGTACTAGAGCTTATTTTCTAGAGCCATATA 1150
||||||||||||||.||||||.|||||.||||||||||||||||||||||
RBAM_034510__ 1101 GATTGTATTTTCTCGCGATAGCACTAGGGCTTATTTTCTAGAGCCATATA 1150
BSNT_05725___ 1151 GTGAACCGTTTCTCATTAATAACTTATATGTAGTTAATACGGCCAGACAG 1200
||||||||||||||||||||||||||||.||||||||||||||..|||||
RBAM_034510__ 1151 GTGAACCGTTTCTCATTAATAACTTATACGTAGTTAATACGGCTGGACAG 1200
BSNT_05725___ 1201 AGGATCATTGCAAACGTGTCTCTCCCCGGCGCCTTTGACCTCGCCGTAAC 1250
|||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_034510__ 1201 AGGATCATTGCAAACGTGTCTCTGCCCGGCGCCTTTGACCTCGCCGTAAC 1250
BSNT_05725___ 1251 GCCGGACAAACAGTATATTTATGCGGCACAGCCCAACGACAATGCTGTGA 1300
.||.||.||.|||...||||||||.|||||||||..|||||||.|.||.|
RBAM_034510__ 1251 ACCTGATAATCAGGGCATTTATGCAGCACAGCCCGGCGACAATACCGTAA 1300
BSNT_05725___ 1301 CCGTGTACCGCACAAGTGATTATACAGCCGTGACGGTGATTCCGGTTGGC 1350
|||||||||||||.|||||||||||||||.|||||||||||||||||||.
RBAM_034510__ 1301 CCGTGTACCGCACGAGTGATTATACAGCCATGACGGTGATTCCGGTTGGG 1350
BSNT_05725___ 1351 GCGGGTCCGTCTGCGATTGCGATGTAG 1377
.|.||||||||.|||||||||||||||
RBAM_034510__ 1351 ACTGGTCCGTCAGCGATTGCGATGTAG 1377
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