Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05709 and RBAM_034480
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:13
# Commandline: needle
# -asequence dna-align/BSNT_05709___argS.1.9828.seq
# -bsequence dna-align/RBAM_034480___argS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05709___argS-RBAM_034480___argS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05709___argS-RBAM_034480___argS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05709___argS
# 2: RBAM_034480___argS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1678
# Identity: 1435/1678 (85.5%)
# Similarity: 1435/1678 (85.5%)
# Gaps: 14/1678 ( 0.8%)
# Score: 6157.0
#
#
#=======================================
BSNT_05709___ 1 ATGAACATTGCGGAACAAATGAAGGACGTGCTGAAAGAAGAAATCAAAGC 50
|||||||||||||||||||||||||||||||||||.||||||||||||||
RBAM_034480__ 1 ATGAACATTGCGGAACAAATGAAGGACGTGCTGAAGGAAGAAATCAAAGC 50
BSNT_05709___ 51 GGCCGTTCTGAAAGCGGGACTGGCTGAAGAAAGCCAGATTCCCAATGTTG 100
||||||||||||||||||.|||||.||.||||||||||||||.|..||..
RBAM_034480__ 51 GGCCGTTCTGAAAGCGGGCCTGGCGGACGAAAGCCAGATTCCAAGCGTAC 100
BSNT_05709___ 101 TTTTAGAAACACCGAAAGATAAAACACACGGCGACTACTCAACGAATATG 150
|.||||||||.||||||||.|||||||||||.||.||.||.||.||.|||
RBAM_034480__ 101 TGTTAGAAACGCCGAAAGAAAAAACACACGGTGATTATTCCACAAACATG 150
BSNT_05709___ 151 GCGATGCAGCTGGCAAGAGTGGCAAAAAAAGCGCCGCGCCAAATCGCTGA 200
||||||||||||||.|||.|.|||||||||||||||||||||||||||||
RBAM_034480__ 151 GCGATGCAGCTGGCGAGAATCGCAAAAAAAGCGCCGCGCCAAATCGCTGA 200
BSNT_05709___ 201 AGAGATTGTCGC-CCATTTTGATAAAGGAAAGGCTTCGATTGAAAAACTG 249
.|||||.||.|| .|| |||||||||||.||.|||||.||||||||..||
RBAM_034480__ 201 GGAGATCGTGGCGTCA-TTTGATAAAGGCAAAGCTTCCATTGAAAAGATG 249
BSNT_05709___ 250 GATATCGCCGGCCCGGGTTTTATCAATTTCTATATGAACAATCA-ATATT 298
|||||.||.||.||.||.||||||||.||.||.|||||||| || .||.|
RBAM_034480__ 250 GATATTGCGGGACCTGGCTTTATCAACTTTTACATGAACAA-CAGCTACT 298
BSNT_05709___ 299 TAACAAAGCTGATTCCGTCTGTACTGGAAGCAGGGGAAGCA-TACGGGGA 347
|||||||.|||||||||||.||.||.|||||.||.||| || |||||.||
RBAM_034480__ 299 TAACAAAACTGATTCCGTCCGTGCTTGAAGCGGGTGAA-CATTACGGAGA 347
BSNT_05709___ 348 AACGAACATCGGAAACGGTGAACGAG-TTCAGGTAGAATTCGTATCAGCG 396
.||.|||||||||.|.||.||| .|| |||||||.||||||||||||||.
RBAM_034480__ 348 GACAAACATCGGACAAGGCGAA-AAGATTCAGGTCGAATTCGTATCAGCC 396
BSNT_05709___ 397 AATCCGACGGGAGACCTTCACCTCGGGCATGCGCGCGGGGCGGCTGTCGG 446
||.|||||||||||.||||||.|.||.|||||||||||.|||||.||.||
RBAM_034480__ 397 AACCCGACGGGAGATCTTCACTTAGGCCATGCGCGCGGCGCGGCGGTAGG 446
BSNT_05709___ 447 CGATTCCTTGTGCAACGTGCTTTCAAAAGCGGGTTACGATGTAAGCCGCG 496
.||..|..||||||.|||.|||||.||||||||.||.|||||.|||||||
RBAM_034480__ 447 TGACGCGCTGTGCAGCGTTCTTTCTAAAGCGGGCTATGATGTGAGCCGCG 496
BSNT_05709___ 497 AATACTACATTAACGATGCGGGTAACCAAATCAACAATCTGGCGCTTTCT 546
|.|||||.|||||.||||||||.|||||.||.|||||.|||||||||||.
RBAM_034480__ 497 AGTACTATATTAATGATGCGGGCAACCAGATTAACAACCTGGCGCTTTCC 546
BSNT_05709___ 547 GTTGAAGTCCGTTACTTTGAAGCACTCGGATTGGAAAAACCGATGCCGGA 596
||||||||||||||.||||||||.|||||..|.||.||||||||||||||
RBAM_034480__ 547 GTTGAAGTCCGTTATTTTGAAGCGCTCGGTCTTGAGAAACCGATGCCGGA 596
BSNT_05709___ 597 GGATGGCTACCGCGGCGAGGATATCATTGCGATCGG---AAAGCGTCTCG 643
.||.||||||||||||||||||||.||.||.||||| |||| ||.|
RBAM_034480__ 597 AGACGGCTACCGCGGCGAGGATATTATCGCCATCGGGAAAAAG---CTTG 643
BSNT_05709___ 644 CTGAGGAATACGGTGATCGTTTCGTTAACGAAGAAGAAAGTGAACGCCTC 693
|.||.||.|.|||.||.||||||||..|.|||||.||.||.|||||.|..
RBAM_034480__ 644 CCGAAGATTTCGGCGACCGTTTCGTACATGAAGAGGAGAGCGAACGTCAG 693
BSNT_05709___ 694 GCGTTTTTCCGTGAATACGGCCTGAAATATGAGCTGGAAAAGCTTCGCAA 743
|||||||||||||||||||||.|.||.||.|||||.||.||.||||||..
RBAM_034480__ 694 GCGTTTTTCCGTGAATACGGCTTAAAGTACGAGCTTGATAAACTTCGCTC 743
BSNT_05709___ 744 GGACTTGGAAAACTTCCGTGTGCCGTTTGATGTGTGGTATTCAGAAACTT 793
.|||.|||||||.|||||.|||||||||||.||.||||||||.|||||.|
RBAM_034480__ 744 CGACCTGGAAAATTTCCGCGTGCCGTTTGACGTATGGTATTCTGAAACGT 793
BSNT_05709___ 794 CACTGTACCAAAATGGAAAAATCGACAAGGCGCTTGAAGCGCTCCGCGAA 843
||||||||.||||.||||||||.||..||||||||||.|||||.||||||
RBAM_034480__ 794 CACTGTACGAAAACGGAAAAATTGATCAGGCGCTTGAGGCGCTTCGCGAA 843
BSNT_05709___ 844 AAAGGCCATGTCTATGAAGAAGACGGCGCGACTTGGTTCCGTTCCACGAC 893
||.||||||||.||.|||||.|||||||||||.||||||||.|||||.||
RBAM_034480__ 844 AAGGGCCATGTATACGAAGAGGACGGCGCGACATGGTTCCGCTCCACAAC 893
BSNT_05709___ 894 GTTTGGCGATGATAAAGACCGCGTATTGATCAAGAAGGACGGCACGTACA 943
|||.|||||.|||||||||||.||..|||||||.||.||||||.|.||.|
RBAM_034480__ 894 GTTCGGCGACGATAAAGACCGTGTGCTGATCAAAAAAGACGGCTCATATA 943
BSNT_05709___ 944 CGTACCTGCTTCCTGATATCGCGTATCATAAGGACAAGCTTGACCGCGGC 993
|.||..||||.||.||||||||.||.|||||.|||||.|||||||||||.
RBAM_034480__ 944 CTTATTTGCTGCCGGATATCGCATACCATAAAGACAAACTTGACCGCGGA 993
BSNT_05709___ 994 TTTGATAAGCTGATCAACGTTTGGGGCGCCGATCACCACGGCTACATCCC 1043
||.||.|||||.|||||.||.||||||||.|||||||||||.||.||.||
RBAM_034480__ 994 TTCGACAAGCTCATCAATGTATGGGGCGCGGATCACCACGGGTATATTCC 1043
BSNT_05709___ 1044 GCGTATGAAAGCGGCAATCGAAGCGCTGGGCTATGAAAAAGGAACGCTTG 1093
||||||||||||||||||.||||||||.||.||..|.|||||.||..|.|
RBAM_034480__ 1044 GCGTATGAAAGCGGCAATTGAAGCGCTCGGTTACAAGAAAGGCACATTGG 1093
BSNT_05709___ 1094 AAGTAGAAATCATTCAGCTCGTTCACCTTTACAAAAACGGCGAGAAAATG 1143
||||.||.|||||||||||||||||..|.||||||||||||||.||||||
RBAM_034480__ 1094 AAGTTGAGATCATTCAGCTCGTTCATTTATACAAAAACGGCGAAAAAATG 1143
BSNT_05709___ 1144 AAAATGAGCAAACGGACCGGTAAAGCCGTAACGATGCGTGACCTGATTGA 1193
||.|||||||||||.||.||.|||||||||||||||||.|||.|||||||
RBAM_034480__ 1144 AAGATGAGCAAACGTACGGGGAAAGCCGTAACGATGCGCGACTTGATTGA 1193
BSNT_05709___ 1194 AGAAGTCGGCTTGGATGCCGTTCGTTACTTCTTTGCGATGCGAAGTGCGG 1243
|||||||||||||||||||||.|||||.|||||.||||||||.||.||.|
RBAM_034480__ 1194 AGAAGTCGGCTTGGATGCCGTGCGTTATTTCTTCGCGATGCGCAGCGCTG 1243
BSNT_05709___ 1244 ACACCCATATGGATTTTGACTTAGATCTTGCTGTATCAACATCTAACGAA 1293
|.||.||.||||||||||||||.||||||||.|||||.||||||||||||
RBAM_034480__ 1244 ATACGCACATGGATTTTGACTTGGATCTTGCCGTATCCACATCTAACGAA 1293
BSNT_05709___ 1294 AACCCTGTGTATTATGCACAATATGCACATGCCCGAATCTGCAGCATGCT 1343
|||||||||||||||||||||||.||||||||.||.||.|||||||||||
RBAM_034480__ 1294 AACCCTGTGTATTATGCACAATACGCACATGCACGTATTTGCAGCATGCT 1343
BSNT_05709___ 1344 TCGCCAAGGGGAAGAGCAGGGACTTAAACCGGCGGCGGATCTTGATTTCA 1393
||||||||||||.|||||||||||||||||||||||.|||||||||||||
RBAM_034480__ 1344 TCGCCAAGGGGAGGAGCAGGGACTTAAACCGGCGGCAGATCTTGATTTCA 1393
BSNT_05709___ 1394 GCCATATTCAATCAGAAAAAGAATACGATCTGCTGAAAACGATCGGCGGC 1443
|||||||||||||||||||||||||.||.|||||||||||||||||||||
RBAM_034480__ 1394 GCCATATTCAATCAGAAAAAGAATATGACCTGCTGAAAACGATCGGCGGC 1443
BSNT_05709___ 1444 TTCCCAGAGGCAGTGGCGGAAGCAGCGGAAAAACGAATTCCGCACCGTGT 1493
|||||.|||||||||||.|||||.|||||||||||.|||||.||||||||
RBAM_034480__ 1444 TTCCCTGAGGCAGTGGCAGAAGCGGCGGAAAAACGCATTCCTCACCGTGT 1493
BSNT_05709___ 1494 CACAAACTATATTTATGATCTGGCCTCTGCTCTGCACAGCTTCTACAACG 1543
||||||||||||||||||||||||.||.||||||||||||||||||||.|
RBAM_034480__ 1494 CACAAACTATATTTATGATCTGGCTTCCGCTCTGCACAGCTTCTACAATG 1543
BSNT_05709___ 1544 CAGAGAAAGTCATCGACCCTGAAAATGAAGAGAAAAGCCGTGCGCGCCTG 1593
|.||||||||||||||.||.||||||.|||||||.|||||.|||||.||.
RBAM_034480__ 1544 CGGAGAAAGTCATCGATCCGGAAAATAAAGAGAAGAGCCGCGCGCGTCTC 1593
BSNT_05709___ 1594 GCTTTAATGAAGGCAACGCAAATTACGCTGAACAATGCGCTTCAGCTGAT 1643
||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_034480__ 1594 GCTTTAATGAAGGCGACGCAAATTACGCTGAACAATGCGCTTCAGCTGAT 1643
BSNT_05709___ 1644 CGGCGTATCGGCTCCGGAAAAAATGTAA 1671
|||||||||.||||||||||||||||||
RBAM_034480__ 1644 CGGCGTATCCGCTCCGGAAAAAATGTAA 1671
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