Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05707 and RBAM_034470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:13
# Commandline: needle
# -asequence dna-align/BSNT_05707___narK.1.9828.seq
# -bsequence dna-align/RBAM_034470___narK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05707___narK-RBAM_034470___narK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05707___narK-RBAM_034470___narK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05707___narK
# 2: RBAM_034470___narK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1192
# Identity: 1000/1192 (83.9%)
# Similarity: 1000/1192 (83.9%)
# Gaps: 65/1192 ( 5.5%)
# Score: 4472.0
#
#
#=======================================
BSNT_05707___ 0 -------------------------------------------------- 0
RBAM_034470__ 1 ATGATCAATCGTCAACATATTCAATTATCGTTGCAGTCATTAAGCTTAGT 50
BSNT_05707___ 1 ----------ATGGTTTGGGTGCTGATTTCATCACTCATTTCCCAAATCA 40
|||||.|||||||||||||||||.||||||||.|||||.|
RBAM_034470__ 51 GGCAGGGTTTATGGTGTGGGTGCTGATTTCATCGCTCATTTCTCAAATGA 100
BSNT_05707___ 41 CATTAGATATTCATTTAAGCAAGGGTGAGATTTCTTTAGTGACCGCGATT 90
|||.||||||||||||||||||.||.||.|||||.||.|||||.||||||
RBAM_034470__ 101 CATCAGATATTCATTTAAGCAAAGGCGAAATTTCATTGGTGACGGCGATT 150
BSNT_05707___ 91 CCTGTGATCCTCGGGTCGCTTCTCCGCATTCCTTTAGGGTATTTAACGAA 140
||.||.||.|||||.|||||||||||.|||||||||||.|||||||||||
RBAM_034470__ 151 CCCGTTATTCTCGGATCGCTTCTCCGTATTCCTTTAGGATATTTAACGAA 200
BSNT_05707___ 141 CAGGTTTGGCGCGCGGCTCATGTTTATGGTCAGCTTCATCCTGCTTTTAT 190
|||||..||.||||||||.|||||||||.|||||||||||||||||||.|
RBAM_034470__ 201 CAGGTACGGGGCGCGGCTGATGTTTATGATCAGCTTCATCCTGCTTTTGT 250
BSNT_05707___ 191 TTCCTGTATTTTGGATCAGTATCGCGGATTCTCTGTTTGATTTAATCGCA 240
||||||||||||||||||||||||||||||||.|.||||||||||||||.
RBAM_034470__ 251 TTCCTGTATTTTGGATCAGTATCGCGGATTCTTTATTTGATTTAATCGCG 300
BSNT_05707___ 241 GGCGGCTTTTTCTTAGGGATCGGGGGAGCGGTGTTTTCCATTGGAGTGAC 290
||||||||||||||||||||||||||||||||.||.|||||.||||||||
RBAM_034470__ 301 GGCGGCTTTTTCTTAGGGATCGGGGGAGCGGTATTCTCCATCGGAGTGAC 350
BSNT_05707___ 291 CTCCCTCCCGAAATATTATCCGAAAGAAAAGCACGGTGTCGTCAATGGGA 340
.|||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_034470__ 351 GTCCCTCCCGAAATATTATCCGAAAGAAAAGCACGGAGTCGTCAATGGGA 400
BSNT_05707___ 341 TTTACGGTGCAGGAAATATCGGGACAGCCGTTACGACATTTGCAGCGCCG 390
||||||||||.|||||.||||||||.||||||||.||.|||||.||||||
RBAM_034470__ 401 TTTACGGTGCCGGAAACATCGGGACCGCCGTTACTACCTTTGCGGCGCCG 450
BSNT_05707___ 391 GTTATCGCTCAAGCCGTCGGG-TGGAAATCAACCGTGCAGATGTATCTGA 439
|||||||||||||||| |||| ||||||.|||||||||||||||||||..
RBAM_034470__ 451 GTTATCGCTCAAGCCG-CGGGATGGAAAGCAACCGTGCAGATGTATCTTG 499
BSNT_05707___ 440 TTTTGCTGGCTGTCTTTGCCTTACTGCACGTGTTGTTTGGCGACAGGCAT 489
|||||||||||||.||.||.|||||||||||.|||||.||||||.|||||
RBAM_034470__ 500 TTTTGCTGGCTGTTTTCGCATTACTGCACGTTTTGTTCGGCGACCGGCAT 549
BSNT_05707___ 490 GAGAAGAAGGTCAAAGTTTCTGTTAAGACTCAAATCAAAGCCGTTTACCG 539
||||||||.|||||||||||..|.|||||.|||||.||||||||||||||
RBAM_034470__ 550 GAGAAGAAAGTCAAAGTTTCCATAAAGACACAAATGAAAGCCGTTTACCG 599
BSNT_05707___ 540 AAATCATGTGCTATGGTTTCTGAGCCTGTTTTATTTTATTACGTTCGGTG 589
||||||||||||.|||.|..||||||||||||||||||||||||||||.|
RBAM_034470__ 600 AAATCATGTGCTGTGGATGTTGAGCCTGTTTTATTTTATTACGTTCGGCG 649
BSNT_05707___ 590 CCTTTGTCGCCTTCACTATCTATCTGCCGAACTTTCTGGTGGAGCATTTT 639
|||||||||||||.||.||||||||.|||||.|||.||||.|||||||||
RBAM_034470__ 650 CCTTTGTCGCCTTTACCATCTATCTTCCGAATTTTTTGGTTGAGCATTTT 699
BSNT_05707___ 640 GGGCTGAATCCTGCAGATGCCGGCTTGCGGACGGCTGGCTTTATTGCGGT 689
|||||||..|||||.||.|||||..||||||||||.||||||||||||||
RBAM_034470__ 700 GGGCTGAGCCCTGCGGACGCCGGTCTGCGGACGGCCGGCTTTATTGCGGT 749
BSNT_05707___ 690 TTCTACGCTGCTCAGGCCTGCAGGCGGATTCCTGGCTGATAAAATGAGCC 739
.|||||||||||||||||||..||.||.||.||.||.||||||.||||||
RBAM_034470__ 750 CTCTACGCTGCTCAGGCCTGTGGGAGGGTTTCTTGCAGATAAACTGAGCC 799
BSNT_05707___ 740 CGCTCCGCATCTTGATGTTTGTTTTTGCCGGGCTTACATTATCAGGCATT 789
||||||||||..|||||||.|||||.||.||||||||..|.|||||..|.
RBAM_034470__ 800 CGCTCCGCATTCTGATGTTCGTTTTCGCAGGGCTTACGCTGTCAGGGGTC 849
BSNT_05707___ 790 ATCCTATCATTCTCGCCGACAATCGGCCTTTATACGTTTGGATCATTAAC 839
||.||.||||||||.|||||.||||||||||||.||||.|||||..|.||
RBAM_034470__ 850 ATGCTGTCATTCTCCCCGACGATCGGCCTTTATGCGTTCGGATCGCTGAC 899
BSNT_05707___ 840 CGTGGCTGTCTGCTCAGGCATAGGAAACGGGACTGTTTTTAAACTGGTGC 889
.|||||.|||||||||||.||.|||||||||||.||.|||||||||||||
RBAM_034470__ 900 GGTGGCAGTCTGCTCAGGGATTGGAAACGGGACGGTATTTAAACTGGTGC 949
BSNT_05707___ 890 CTTTCTATTTTTCCAAGCAAGCGGGGATTGCCAATGGGATTGTGTCTGCC 939
|||||||||||||.||||||||||||||||||||.||.||||||||||||
RBAM_034470__ 950 CTTTCTATTTTTCGAAGCAAGCGGGGATTGCCAACGGTATTGTGTCTGCC 999
BSNT_05707___ 940 ATGGGCGGATTAGGCGGCTTTTTTCCTCCGCTCATATTGGCGAGTGTATT 989
|||||||||.|.|||||.|||||.||||||||.||..||||.||||||||
RBAM_034470__ 1000 ATGGGCGGACTGGGCGGTTTTTTCCCTCCGCTGATTCTGGCAAGTGTATT 1049
BSNT_05707___ 990 TCAGGCAACAGGCCAGTACGCGATCGGGTTTATGGCGCTTTCAGAGGTGG 1039
|||||||||||||||.||||||||||||||||||||||||||||||||.|
RBAM_034470__ 1050 TCAGGCAACAGGCCAATACGCGATCGGGTTTATGGCGCTTTCAGAGGTCG 1099
BSNT_05707___ 1040 CGTTAGCCAGTTTTGTCCTTGTCATATGGATGTATTGGCAGGAAAGAATG 1089
||||||||||.|||||.|||||.||.||||||||||||||||||||||||
RBAM_034470__ 1100 CGTTAGCCAGCTTTGTTCTTGTGATCTGGATGTATTGGCAGGAAAGAATG 1149
BSNT_05707___ 1090 AAAACACACACGGAGAGAAACAGCCAGAGCATCAACTAA--- 1128
||||||||.||||||||||||||.||||||.||||.|.|
RBAM_034470__ 1150 AAAACACATACGGAGAGAAACAGTCAGAGCCTCAATTCATAA 1191
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