Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05707 and RBAM_034470

See Amino acid alignment / Visit BSNT_05707 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence dna-align/BSNT_05707___narK.1.9828.seq
#    -bsequence dna-align/RBAM_034470___narK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05707___narK-RBAM_034470___narK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05707___narK-RBAM_034470___narK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05707___narK
# 2: RBAM_034470___narK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1192
# Identity:    1000/1192 (83.9%)
# Similarity:  1000/1192 (83.9%)
# Gaps:          65/1192 ( 5.5%)
# Score: 4472.0
# 
#
#=======================================

BSNT_05707___      0 --------------------------------------------------      0
                                                                       
RBAM_034470__      1 ATGATCAATCGTCAACATATTCAATTATCGTTGCAGTCATTAAGCTTAGT     50

BSNT_05707___      1 ----------ATGGTTTGGGTGCTGATTTCATCACTCATTTCCCAAATCA     40
                               |||||.|||||||||||||||||.||||||||.|||||.|
RBAM_034470__     51 GGCAGGGTTTATGGTGTGGGTGCTGATTTCATCGCTCATTTCTCAAATGA    100

BSNT_05707___     41 CATTAGATATTCATTTAAGCAAGGGTGAGATTTCTTTAGTGACCGCGATT     90
                     |||.||||||||||||||||||.||.||.|||||.||.|||||.||||||
RBAM_034470__    101 CATCAGATATTCATTTAAGCAAAGGCGAAATTTCATTGGTGACGGCGATT    150

BSNT_05707___     91 CCTGTGATCCTCGGGTCGCTTCTCCGCATTCCTTTAGGGTATTTAACGAA    140
                     ||.||.||.|||||.|||||||||||.|||||||||||.|||||||||||
RBAM_034470__    151 CCCGTTATTCTCGGATCGCTTCTCCGTATTCCTTTAGGATATTTAACGAA    200

BSNT_05707___    141 CAGGTTTGGCGCGCGGCTCATGTTTATGGTCAGCTTCATCCTGCTTTTAT    190
                     |||||..||.||||||||.|||||||||.|||||||||||||||||||.|
RBAM_034470__    201 CAGGTACGGGGCGCGGCTGATGTTTATGATCAGCTTCATCCTGCTTTTGT    250

BSNT_05707___    191 TTCCTGTATTTTGGATCAGTATCGCGGATTCTCTGTTTGATTTAATCGCA    240
                     ||||||||||||||||||||||||||||||||.|.||||||||||||||.
RBAM_034470__    251 TTCCTGTATTTTGGATCAGTATCGCGGATTCTTTATTTGATTTAATCGCG    300

BSNT_05707___    241 GGCGGCTTTTTCTTAGGGATCGGGGGAGCGGTGTTTTCCATTGGAGTGAC    290
                     ||||||||||||||||||||||||||||||||.||.|||||.||||||||
RBAM_034470__    301 GGCGGCTTTTTCTTAGGGATCGGGGGAGCGGTATTCTCCATCGGAGTGAC    350

BSNT_05707___    291 CTCCCTCCCGAAATATTATCCGAAAGAAAAGCACGGTGTCGTCAATGGGA    340
                     .|||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_034470__    351 GTCCCTCCCGAAATATTATCCGAAAGAAAAGCACGGAGTCGTCAATGGGA    400

BSNT_05707___    341 TTTACGGTGCAGGAAATATCGGGACAGCCGTTACGACATTTGCAGCGCCG    390
                     ||||||||||.|||||.||||||||.||||||||.||.|||||.||||||
RBAM_034470__    401 TTTACGGTGCCGGAAACATCGGGACCGCCGTTACTACCTTTGCGGCGCCG    450

BSNT_05707___    391 GTTATCGCTCAAGCCGTCGGG-TGGAAATCAACCGTGCAGATGTATCTGA    439
                     |||||||||||||||| |||| ||||||.|||||||||||||||||||..
RBAM_034470__    451 GTTATCGCTCAAGCCG-CGGGATGGAAAGCAACCGTGCAGATGTATCTTG    499

BSNT_05707___    440 TTTTGCTGGCTGTCTTTGCCTTACTGCACGTGTTGTTTGGCGACAGGCAT    489
                     |||||||||||||.||.||.|||||||||||.|||||.||||||.|||||
RBAM_034470__    500 TTTTGCTGGCTGTTTTCGCATTACTGCACGTTTTGTTCGGCGACCGGCAT    549

BSNT_05707___    490 GAGAAGAAGGTCAAAGTTTCTGTTAAGACTCAAATCAAAGCCGTTTACCG    539
                     ||||||||.|||||||||||..|.|||||.|||||.||||||||||||||
RBAM_034470__    550 GAGAAGAAAGTCAAAGTTTCCATAAAGACACAAATGAAAGCCGTTTACCG    599

BSNT_05707___    540 AAATCATGTGCTATGGTTTCTGAGCCTGTTTTATTTTATTACGTTCGGTG    589
                     ||||||||||||.|||.|..||||||||||||||||||||||||||||.|
RBAM_034470__    600 AAATCATGTGCTGTGGATGTTGAGCCTGTTTTATTTTATTACGTTCGGCG    649

BSNT_05707___    590 CCTTTGTCGCCTTCACTATCTATCTGCCGAACTTTCTGGTGGAGCATTTT    639
                     |||||||||||||.||.||||||||.|||||.|||.||||.|||||||||
RBAM_034470__    650 CCTTTGTCGCCTTTACCATCTATCTTCCGAATTTTTTGGTTGAGCATTTT    699

BSNT_05707___    640 GGGCTGAATCCTGCAGATGCCGGCTTGCGGACGGCTGGCTTTATTGCGGT    689
                     |||||||..|||||.||.|||||..||||||||||.||||||||||||||
RBAM_034470__    700 GGGCTGAGCCCTGCGGACGCCGGTCTGCGGACGGCCGGCTTTATTGCGGT    749

BSNT_05707___    690 TTCTACGCTGCTCAGGCCTGCAGGCGGATTCCTGGCTGATAAAATGAGCC    739
                     .|||||||||||||||||||..||.||.||.||.||.||||||.||||||
RBAM_034470__    750 CTCTACGCTGCTCAGGCCTGTGGGAGGGTTTCTTGCAGATAAACTGAGCC    799

BSNT_05707___    740 CGCTCCGCATCTTGATGTTTGTTTTTGCCGGGCTTACATTATCAGGCATT    789
                     ||||||||||..|||||||.|||||.||.||||||||..|.|||||..|.
RBAM_034470__    800 CGCTCCGCATTCTGATGTTCGTTTTCGCAGGGCTTACGCTGTCAGGGGTC    849

BSNT_05707___    790 ATCCTATCATTCTCGCCGACAATCGGCCTTTATACGTTTGGATCATTAAC    839
                     ||.||.||||||||.|||||.||||||||||||.||||.|||||..|.||
RBAM_034470__    850 ATGCTGTCATTCTCCCCGACGATCGGCCTTTATGCGTTCGGATCGCTGAC    899

BSNT_05707___    840 CGTGGCTGTCTGCTCAGGCATAGGAAACGGGACTGTTTTTAAACTGGTGC    889
                     .|||||.|||||||||||.||.|||||||||||.||.|||||||||||||
RBAM_034470__    900 GGTGGCAGTCTGCTCAGGGATTGGAAACGGGACGGTATTTAAACTGGTGC    949

BSNT_05707___    890 CTTTCTATTTTTCCAAGCAAGCGGGGATTGCCAATGGGATTGTGTCTGCC    939
                     |||||||||||||.||||||||||||||||||||.||.||||||||||||
RBAM_034470__    950 CTTTCTATTTTTCGAAGCAAGCGGGGATTGCCAACGGTATTGTGTCTGCC    999

BSNT_05707___    940 ATGGGCGGATTAGGCGGCTTTTTTCCTCCGCTCATATTGGCGAGTGTATT    989
                     |||||||||.|.|||||.|||||.||||||||.||..||||.||||||||
RBAM_034470__   1000 ATGGGCGGACTGGGCGGTTTTTTCCCTCCGCTGATTCTGGCAAGTGTATT   1049

BSNT_05707___    990 TCAGGCAACAGGCCAGTACGCGATCGGGTTTATGGCGCTTTCAGAGGTGG   1039
                     |||||||||||||||.||||||||||||||||||||||||||||||||.|
RBAM_034470__   1050 TCAGGCAACAGGCCAATACGCGATCGGGTTTATGGCGCTTTCAGAGGTCG   1099

BSNT_05707___   1040 CGTTAGCCAGTTTTGTCCTTGTCATATGGATGTATTGGCAGGAAAGAATG   1089
                     ||||||||||.|||||.|||||.||.||||||||||||||||||||||||
RBAM_034470__   1100 CGTTAGCCAGCTTTGTTCTTGTGATCTGGATGTATTGGCAGGAAAGAATG   1149

BSNT_05707___   1090 AAAACACACACGGAGAGAAACAGCCAGAGCATCAACTAA---   1128
                     ||||||||.||||||||||||||.||||||.||||.|.|   
RBAM_034470__   1150 AAAACACATACGGAGAGAAACAGTCAGAGCCTCAATTCATAA   1191


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