Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05695 and RBAM_034410

See Amino acid alignment / Visit BSNT_05695 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:12
# Commandline: needle
#    -asequence dna-align/BSNT_05695___narJ.1.9828.seq
#    -bsequence dna-align/RBAM_034410___narJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05695___narJ-RBAM_034410___narJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05695___narJ-RBAM_034410___narJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05695___narJ
# 2: RBAM_034410___narJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     501/558 (89.8%)
# Similarity:   501/558 (89.8%)
# Gaps:           3/558 ( 0.5%)
# Score: 2278.0
# 
#
#=======================================

BSNT_05695___      1 ATGAACACCACAGACCGGCAAATTACGTTCTCCGCTCTATCCACTCTTCT     50
                     |||||||||||||||||||||||.||||||||||||||.|||..||||||
RBAM_034410__      1 ATGAACACCACAGACCGGCAAATGACGTTCTCCGCTCTTTCCGTTCTTCT     50

BSNT_05695___     51 CTCTTATCCGGATGAAGAGTGGAGAGCCGAGATTCCCGATTGGAAGGCTC    100
                     |||.||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_034410__     51 CTCATATCCGGAGGAAGAGTGGAGAGCCGAGATTCCCGATTGGAAGGCTC    100

BSNT_05695___    101 TTATCCATGAAATCAGCAACCGGCAAATCCGGGAGAAGCTGCTGCACTTT    150
                     ||||||||||.||||.|||.|.|||||||||||||||..|||||||||||
RBAM_034410__    101 TTATCCATGACATCACCAATCAGCAAATCCGGGAGAAATTGCTGCACTTT    150

BSNT_05695___    151 TTCGAAGCGTCAGCCAGCTTTTCACCGGAAGCGCTGATTGAACACTATGT    200
                     ||.||.|||.|||||.|||||||.|||.||||||||||||||||||||||
RBAM_034410__    151 TTAGAGGCGGCAGCCGGCTTTTCTCCGCAAGCGCTGATTGAACACTATGT    200

BSNT_05695___    201 CTATACATTCGACTTTGGGAAAAAAACAAATATGTATGTCACCTACTTTA    250
                     .|||||.|||||.||.||.||||||||.||||||||.|||||||||||||
RBAM_034410__    201 GTATACGTTCGATTTCGGAAAAAAAACGAATATGTACGTCACCTACTTTA    250

BSNT_05695___    251 ACTCGGGCGAGCAAAGGGAACGCGGCGTTGAATTGCTGCATTTAAAAAAC    300
                     ||||.|||||.|||||||||||||||.|||||||||||||||||||||||
RBAM_034410__    251 ACTCAGGCGAACAAAGGGAACGCGGCATTGAATTGCTGCATTTAAAAAAC    300

BSNT_05695___    301 ACATACGAGCAATCCGGTTTCCTGCCGACAGAGAAAGAGCTGCCTGATTA    350
                     ||.|||.|||||||||||||||||||||||||||||||.|||||||||||
RBAM_034410__    301 ACCTACCAGCAATCCGGTTTCCTGCCGACAGAGAAAGAACTGCCTGATTA    350

BSNT_05695___    351 TCTGCCGCTGATGCTGGAATTTGCTGCGGCTGCAGAAATTGAAGCAGCGA    400
                     .||||||||||||||||||||.||.||||.|||.||.||||||||.||||
RBAM_034410__    351 CCTGCCGCTGATGCTGGAATTCGCCGCGGTTGCGGAGATTGAAGCGGCGA    400

BSNT_05695___    401 GAAGCGTGTTTGAGAAATATCTGTCCAATGTGAGGGAGCTGGCATCCCGT    450
                     |||||||||||||||||||.|||||||||||||||||||||||.|||||.
RBAM_034410__    401 GAAGCGTGTTTGAGAAATACCTGTCCAATGTGAGGGAGCTGGCTTCCCGC    450

BSNT_05695___    451 CTCGAAAAAAATGACAGTATATACGCTGAACTGCTGCACGTGCTGCTGGC    500
                     ||||||||||||.||||.||.||.|||||.||||||||||||||||.|||
RBAM_034410__    451 CTCGAAAAAAATAACAGCATCTATGCTGAGCTGCTGCACGTGCTGCAGGC    500

BSNT_05695___    501 CGCGCTTGAAAACATTGGCGTACGTGAAAGCGTT---GAAGGGGCTGTTC    547
                     |||.||.||||||||.|..||.|||||||||.||   |||||||||||||
RBAM_034410__    501 CGCACTGGAAAACATCGATGTGCGTGAAAGCATTGAAGAAGGGGCTGTTC    550

BSNT_05695___    548 AGGCATGA    555
                     ||||||||
RBAM_034410__    551 AGGCATGA    558


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