Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05694 and RBAM_034400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:12
# Commandline: needle
# -asequence dna-align/BSNT_05694___narI.1.9828.seq
# -bsequence dna-align/RBAM_034400___narI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05694___narI-RBAM_034400___narI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05694___narI-RBAM_034400___narI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05694___narI
# 2: RBAM_034400___narI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 672
# Identity: 617/672 (91.8%)
# Similarity: 617/672 (91.8%)
# Gaps: 0/672 ( 0.0%)
# Score: 2865.0
#
#
#=======================================
BSNT_05694___ 1 ATGAGCGGGCAGATCCTCTGGGGTATTATGCCATACATTGTATTGACAAT 50
|||||||||||||||||.|||||..||||||||||||||||||||||.||
RBAM_034400__ 1 ATGAGCGGGCAGATCCTGTGGGGCGTTATGCCATACATTGTATTGACGAT 50
BSNT_05694___ 51 CTTTATCGGCGGCCATATTTACCGCTACCAGCATGACCAATTTGGCTGGA 100
||||||||||||.||||||||||||||.||||||||||||||.|||||||
RBAM_034400__ 51 CTTTATCGGCGGGCATATTTACCGCTATCAGCATGACCAATTCGGCTGGA 100
BSNT_05694___ 101 CGGCGAAATCAAGCGAGATGTTAGAAAAGAAAAAACTCACCGCGGGCAGC 150
|||||||||||||||||.||||||||||||||||||||.||||.||||||
RBAM_034400__ 101 CGGCGAAATCAAGCGAGCTGTTAGAAAAGAAAAAACTCGCCGCTGGCAGC 150
BSNT_05694___ 151 ACACTTTTTCACTGGGGACTGCTGTGCGTTGTCGGCGGGCATGTCATGGG 200
|||||||||||.||||||||||||||||||||||||||.|||.|||||||
RBAM_034400__ 151 ACACTTTTTCATTGGGGACTGCTGTGCGTTGTCGGCGGACATATCATGGG 200
BSNT_05694___ 201 GATTCTGATCCCGGAAGGCGTGTATGCTTCCCTTGGCATTTCAGAGCATA 250
.|||||||||||||||||||||||||||||||||||.|||||.|||||||
RBAM_034400__ 201 AATTCTGATCCCGGAAGGCGTGTATGCTTCCCTTGGTATTTCCGAGCATA 250
BSNT_05694___ 251 TGTATCACAAAATGGCGATTGGCGCTGGCTTGCCGGCGGGCATTGCGGCA 300
|||||||||||||||||||.|||||.|||.||||||||||.||.||||||
RBAM_034400__ 251 TGTATCACAAAATGGCGATCGGCGCAGGCCTGCCGGCGGGGATCGCGGCA 300
BSNT_05694___ 301 TGTACCGGACTTGTCATCCTGACGTACAGAAGGCTGTTTGACAAAAGGAT 350
|||.|||||||||||||||||||||||||||||||||||||||||||.||
RBAM_034400__ 301 TGTGCCGGACTTGTCATCCTGACGTACAGAAGGCTGTTTGACAAAAGAAT 350
BSNT_05694___ 351 CCGCAAAACCAGCTCGCCATCAGATATCCTTACGCTGCTCCTGCTGCTGT 400
|||||||||||||||||||||.||||||.|.|||||..|.||||||||||
RBAM_034400__ 351 CCGCAAAACCAGCTCGCCATCGGATATCTTGACGCTTATTCTGCTGCTGT 400
BSNT_05694___ 401 TCATGATGCTGTCAGGCGTTGCGGCCACGTTTCTCAATATTGATTCGAAA 450
|||||||||||||.||||||||||||||.|||||.||.||||||||||||
RBAM_034400__ 401 TCATGATGCTGTCGGGCGTTGCGGCCACATTTCTTAACATTGATTCGAAA 450
BSNT_05694___ 451 GGATTTGATTACCGGACCACAGTCGGGCCCTGGTTCAGGGAAATCGTTTT 500
||.|||||||||.||.|.|||||||||||.||||||||||||||.|||||
RBAM_034400__ 451 GGCTTTGATTACAGGGCAACAGTCGGGCCGTGGTTCAGGGAAATTGTTTT 500
BSNT_05694___ 501 GTTCAGGCCTGACGCCTCTTTGATGGAGAGTGTCCCGCTATGGTTTAAGT 550
||||.||||||||||.||||||||||||||||||||||||||||||||||
RBAM_034400__ 501 GTTCCGGCCTGACGCTTCTTTGATGGAGAGTGTCCCGCTATGGTTTAAGT 550
BSNT_05694___ 551 TTCATATTGTAATAGGATACGTCGTTTTTATCCTGTGGCCGTTTACGAGA 600
|||||||..|.|||||.|||||||||||||||||.|||||||||||.|||
RBAM_034400__ 551 TTCATATCATCATAGGGTACGTCGTTTTTATCCTTTGGCCGTTTACAAGA 600
BSNT_05694___ 601 TTGGTTCATGTGTTCAGTCTGCCGCTCAAGTATCTGACCCGCAGCTACGT 650
||||||||.||||||||.|||||.|||||||||.|||||||||||||.||
RBAM_034400__ 601 TTGGTTCACGTGTTCAGCCTGCCCCTCAAGTATTTGACCCGCAGCTATGT 650
BSNT_05694___ 651 TGTATATCGGAAACGCTCGTGA 672
|||.||||||||||||.|||.|
RBAM_034400__ 651 TGTCTATCGGAAACGCACGTAA 672
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