Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05691 and RBAM_034380
See
Amino acid alignment /
Visit
BSNT_05691 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:11
# Commandline: needle
# -asequence dna-align/BSNT_05691___ywiE.1.9828.seq
# -bsequence dna-align/RBAM_034380___ywiE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05691___ywiE-RBAM_034380___ywiE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05691___ywiE-RBAM_034380___ywiE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05691___ywiE
# 2: RBAM_034380___ywiE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1591
# Identity: 1170/1591 (73.5%)
# Similarity: 1170/1591 (73.5%)
# Gaps: 113/1591 ( 7.1%)
# Score: 4412.5
#
#
#=======================================
BSNT_05691___ 0 -------------------------------------------------- 0
RBAM_034380__ 1 ATGTTTACAAGCCGGAAAACAGAGGGTATACAGAGATATCGGATCAGATG 50
BSNT_05691___ 1 -------------ATGCTGAAAAGGAGACTGGAATTTTTCTTTTTATATA 37
|||||||||||||||||||||||||.|||||||||||
RBAM_034380__ 51 GGAGAGAGTCGGGATGCTGAAAAGGAGACTGGAATTTTGCTTTTTATATA 100
BSNT_05691___ 38 TGATGCTCATCGGGGCATATGTCATTTGGTTTTTTCCGGTTTCCAGGCTT 87
|||||||.|||||.|||||||||||.||||||||||||||||||||||||
RBAM_034380__ 101 TGATGCTTATCGGAGCATATGTCATATGGTTTTTTCCGGTTTCCAGGCTT 150
BSNT_05691___ 88 GAGTTTTACGGAGGATTGCTTTGCTATATAAGCATTATTTTGTTCAGCAT 137
||||||||||||||..|||||||||||..|||||||||||||||||||||
RBAM_034380__ 151 GAGTTTTACGGAGGGGTGCTTTGCTATGCAAGCATTATTTTGTTCAGCAT 200
BSNT_05691___ 138 CTATTCATTAATTCTTGAAAACCGCACCTCGCAGCACACGCTGCTATGGA 187
||||||.||||||||||||||||||||||||||||||||||||.||||||
RBAM_034380__ 201 CTATTCGTTAATTCTTGAAAACCGCACCTCGCAGCACACGCTGTTATGGA 250
BSNT_05691___ 188 TCCATATTCTTGTCTTTTTTCCAATCGTCGGCTACGTGTTTTATCTGTTT 237
|.|||||||||||.||||||||.||||.|||.|||.|.|||||.||.|||
RBAM_034380__ 251 TTCATATTCTTGTGTTTTTTCCGATCGCCGGGTACTTATTTTACCTTTTT 300
BSNT_05691___ 238 TCGGGACAGCTTTATGTAAAGGGAAAGCTGTTTAAGACAAAACGAATGTA 287
||.||.||||||||||.|||.||.||||||||.|.|.|.|||||.|..||
RBAM_034380__ 301 TCCGGCCAGCTTTATGAAAAAGGCAAGCTGTTCAGGTCGAAACGGACATA 350
BSNT_05691___ 288 CAACAGGGAAAAGCTCAGGAAGCTGTTTGACAAGGAGGAAACGCCCGAAG 337
||||.||||||||||.||.|.|.|.|||||.|.|||..||||.|||||..
RBAM_034380__ 351 CAACCGGGAAAAGCTGAGAACGATATTTGATATGGAACAAACTCCCGACC 400
BSNT_05691___ 338 TAACAGGGCTG-AAGGACAATCAAGAGAGGTTCTTTACCTATTCCATCAA 386
|.||.|||||| ||||| |||||..||.|.||||||...|||||.|||||
RBAM_034380__ 401 TGACCGGGCTGAAAGGA-AATCAGAAGCGTTTCTTTCAATATTCAATCAA 449
BSNT_05691___ 387 GGCTGCCCATATGAATATCAATACGAAAAGCAACATCAAAGTGCTGAAAA 436
|||..|||||||||||||||||||.|||||||...|.||.|||||.||||
RBAM_034380__ 450 GGCGTCCCATATGAATATCAATACAAAAAGCAGGCTGAAGGTGCTCAAAA 499
BSNT_05691___ 437 ACGGCGAAGAAACCTTCCCGGACATTTTCAAAGCGAT----GAGAAAAGC 482
||||.||.|||||.||.|||||..|.||..|.|||.| ||| ||
RBAM_034380__ 500 ACGGGGACGAAACATTTCCGGAGCTGTTTGAGGCGCTCCGGGAG----GC 545
BSNT_05691___ 483 TGAATCTTACATACATATTGAATACTACATGTTTAAATCAGACATGCTCG 532
.|..||.|..|||||||||||.||.||.|||||.||||||||||||||||
RBAM_034380__ 546 CGCGTCATTTATACATATTGAGTATTATATGTTCAAATCAGACATGCTCG 595
BSNT_05691___ 533 GACGCGGCATGATGGACATTATGATGGAGAAAGCGCGCCAGGGTGTCGAG 582
|.|.|...||||||||||||||||||||.||.|||||.||.|||||.||.
RBAM_034380__ 596 GGCACAAGATGATGGACATTATGATGGAAAAGGCGCGTCAAGGTGTGGAA 645
BSNT_05691___ 583 GTGAGGTTTTTATACGATGCGGCAGGAAGCATGAAGCTGGCAAGAAGAGA 632
|||.|||||||.|.|||.|||||.||.|||.||||||||||..|||.|||
RBAM_034380__ 646 GTGCGGTTTTTGTTCGACGCGGCCGGCAGCCTGAAGCTGGCCGGAAAAGA 695
BSNT_05691___ 633 TATTATGAGAATGAAACAAGCGGGGGTGGACATCGTCCCGTTTTCT-CCG 681
|||||..|.|.||||||..|||||.|||.||||||||||| ||||| |||
RBAM_034380__ 696 TATTAAAAAACTGAAACGCGCGGGTGTGAACATCGTCCCG-TTTCTGCCG 744
BSNT_05691___ 682 CTGAAATACGGGTTTTTCAACCAGAAGCTGAATTTCAGAAATCACCGGAA 731
|||||||||||.|||||||||||.||..|.|||||||||||||||||.||
RBAM_034380__ 745 CTGAAATACGGTTTTTTCAACCAAAAATTCAATTTCAGAAATCACCGCAA 794
BSNT_05691___ 732 AATCGTGATCATCGATGGGAAAACCGGTTTTGTGGGCGGATTAAATGTTG 781
.|||||.|||.|.||.||||||..|||||||||.|||||..|.|||||.|
RBAM_034380__ 795 GATCGTCATCGTTGACGGGAAAGTCGGTTTTGTCGGCGGGCTGAATGTCG 844
BSNT_05691___ 782 GGAAGGAATATATCAGCAGAGATCCGTACATCGGATTTTGGAGAGATACA 831
|.|||||.||||||.|||.|||.|...|..||||.||||||.|.||.||.
RBAM_034380__ 845 GCAAGGAGTATATCGGCAAAGACCAAGATGTCGGCTTTTGGCGGGACACC 894
BSNT_05691___ 832 CACCTGCGGCTTGAGGGGGAAATTGTGCAAACGCTCCAC-GCTATCTTTA 880
||..||....|.||.||.|||||.||.||.||||||||| || ||.||||
RBAM_034380__ 895 CATATGAAAGTCGAAGGAGAAATCGTTCAGACGCTCCACAGC-ATTTTTA 943
BSNT_05691___ 881 TGCTGGATTGGGAATATGTCTCCAATGAAGTGCTAATTGATCAAGAGGAG 930
||||.|||||||||||.||.||..||||.|||||.||||||| |||.
RBAM_034380__ 944 TGCTTGATTGGGAATACGTTTCGGATGAGGTGCTGATTGATC----GGAA 989
BSNT_05691___ 931 TACA-ATAC---CCCGGTTCCCGTGGAAGGAGGAGGCATTTATCAAATTG 976
..|| |||| |||||||.|.|..|||.|.||.|||.|.||||||.|.|
RBAM_034380__ 990 AGCATATACCCGCCCGGTTGCGGCAGAAAGCGGCGGCGTCTATCAAGTCG 1039
BSNT_05691___ 977 TCGCAACAGGCCCTGACATGAAGGAAAGCATGAGCGACCTTTATTATGAA 1026
|..|.||||||||.||.||||||||..|.||||||||.||.|||||||..
RBAM_034380__ 1040 TTCCGACAGGCCCCGATATGAAGGAGCGGATGAGCGATCTGTATTATGCC 1089
BSNT_05691___ 1027 ATGATTTCTTCAGC----GCAGAA--ATCAATATGGATCGCCACGCCCTA 1070
||||| ||| ||.||| .||..||||||||||.|||||.||
RBAM_034380__ 1090 ATGAT------AGCGGCGGCCGAATCGTCTGTATGGATCGCGACGCCTTA 1133
BSNT_05691___ 1071 TTTTGTCCCCAATGAATCCATTCGCACGGCGCTAAAAGCAGCGGC-GACA 1119
|||.||.||.|||||..|.||.|||||.||||||||.|..||.|| |.||
RBAM_034380__ 1134 TTTCGTGCCGAATGAGCCGATCCGCACAGCGCTAAAGGAGGCTGCTGCCA 1183
BSNT_05691___ 1120 AAGGGGGTAGAGGTAAGGGTTATGGTGCCGGAGAAGAACGACAGCTTTTT 1169
.| ||.||...|||..|.||.|||||||||||.|..||.|||.|.|||||
RBAM_034380__ 1184 GA-GGCGTCCGGGTGCGTGTCATGGTGCCGGAAACCAATGACGGATTTTT 1232
BSNT_05691___ 1170 GACCCAATACGCGTCGAGGTCCTATTTCCCGGAGCTGCTCCTTGAGGGCA 1219
.|||||.||||||.||||.||.||||||||.|||||.||.|..||.||.|
RBAM_034380__ 1233 AACCCAGTACGCGACGAGATCGTATTTCCCCGAGCTTCTTCGCGAAGGAA 1282
BSNT_05691___ 1220 TTGAAGTGTACTCCTACCAAAAAGGCTTCATGCATCAAAAAGTCATGATC 1269
|.|||||.||.||.||.|||||||||||.|||||||||||.||..|.|||
RBAM_034380__ 1283 TCGAAGTCTATTCTTATCAAAAAGGCTTTATGCATCAAAAGGTGCTCATC 1332
BSNT_05691___ 1270 ATTGATGGCGATCTCGCCTCCGTCGGTACCGCGAATATGGACATGCGCAG 1319
|.|||.||..|.||||||||.|||||.||.|||||||||||||||.|.||
RBAM_034380__ 1333 ACTGACGGAAACCTCGCCTCTGTCGGGACGGCGAATATGGACATGAGAAG 1382
BSNT_05691___ 1320 CTTTCAGCTCAACTTTGAAGTGAATGTGTTCTTCACGGATGCCGAAGCGA 1369
|||||||||.|||||||||||.|||||.||.||.||.|||...||.||||
RBAM_034380__ 1383 CTTTCAGCTGAACTTTGAAGTCAATGTCTTTTTTACAGATCAAGAGGCGA 1432
BSNT_05691___ 1370 TCCGAACCCTTGAGGTCCATTTTGAAGAGGATATGCAGGAAAGTGAAAAG 1419
||..|...|||||.|..||||.|...|||||||||.||||...||||||.
RBAM_034380__ 1433 TCAAAGATCTTGAAGCGCATTATCTGGAGGATATGAAGGAGTCTGAAAAA 1482
BSNT_05691___ 1420 CTCAGCCCTGTCGGCTTTTATAAAAGAGGCG-------TGGCTGACCGGA 1462
.|||||||.|||.|.||.||||| ||| ||| ||..|.|
RBAM_034380__ 1483 ATCAGCCCCGTCCGTTTCTATAA-----GCGCACATTATGG--GAAAGAA 1525
BSNT_05691___ 1463 CAAAAGAGTCATTTGCCCGCCTGTTTTCAAGTGTTCTGTAA 1503
|.||.||.||.||.||.||..|.|||||..|.||..|.|||
RBAM_034380__ 1526 CGAAGGAATCCTTCGCACGGTTATTTTCCGGCGTGTTATAA 1566
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.