Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05684 and RBAM_034350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:11
# Commandline: needle
# -asequence dna-align/BSNT_05684___uvsE.1.9828.seq
# -bsequence dna-align/RBAM_034350___uvsE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05684___uvsE-RBAM_034350___uvsE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05684___uvsE-RBAM_034350___uvsE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05684___uvsE
# 2: RBAM_034350___uvsE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 985
# Identity: 731/985 (74.2%)
# Similarity: 731/985 (74.2%)
# Gaps: 44/985 ( 4.5%)
# Score: 2593.5
#
#
#=======================================
BSNT_05684___ 1 ATGATTTTCAGATTCGGGTTCGTTTCAAATGCGATGAGCCTTTGGGATGC 50
|||.|.|||||||||||.|||||..||||.||.|||.||||||||||.||
RBAM_034350__ 1 ATGCTGTTCAGATTCGGATTCGTCGCAAACGCCATGTGCCTTTGGGACGC 50
BSNT_05684___ 51 GTCTCCCGCTAAAACATTGACATTCGCGCGTTATTCAAAGCTTTCAAAGA 100
|||.|||||.|||||.||.||||..|||||.|||.|.||||||||....|
RBAM_034350__ 51 GTCCCCCGCCAAAACCTTAACATATGCGCGCTATACCAAGCTTTCCCGCA 100
BSNT_05684___ 101 CTGAAAGAAAAGAAGCGCTTCTGACTGTGACAAAAGCCAAT-TTGCACAA 149
.|||..|.|||||.||.||.||..|||||||.|||||.||| ||.| |||
RBAM_034350__ 101 GTGAGCGGAAAGACGCCCTGCTTTCTGTGACGAAAGCAAATCTTAC-CAA 149
BSNT_05684___ 150 TACGATGAGAACCCTTCACTATATCATCGGACACGGCATCCCTTTGTACC 199
|||..||.|.|||.|.||||||.|..||||.|||||||||||..|||||.
RBAM_034350__ 150 TACACTGCGCACCATCCACTATGTGGTCGGCCACGGCATCCCGCTGTACA 199
BSNT_05684___ 200 GTTTTTCCAGTTCGATTGTGCCGCTGGCTACGCATCCCGACGTGATGTGG 249
|.||.||.||.||||||||||||||.||.||.|||||.||.|||.|||||
RBAM_034350__ 200 GGTTCTCAAGCTCGATTGTGCCGCTCGCCACCCATCCGGATGTGCTGTGG 249
BSNT_05684___ 250 GATTTTGTAACACCGTTTCAAAAAGAGTTTCGGGAGATTGGAGAGCTTGT 299
||||||||.||.|||||||...|.||||||.|.|||||.||.|.|||.||
RBAM_034350__ 250 GATTTTGTCACGCCGTTTCGCCAGGAGTTTTGTGAGATCGGCGGGCTGGT 299
BSNT_05684___ 300 TAAAACCCATCAACTGCGAACAAGCTTTCATCCAAATCAATTCACTCTGT 349
.|.||...||.|.||..||||.|||||||||||.||.||||||||.||.|
RBAM_034350__ 300 CAGAAAATATGATCTCAGAACGAGCTTTCATCCGAACCAATTCACGCTTT 349
BSNT_05684___ 350 TTACGAGCCCGA---AGGA-AT--CCGTCACAAAAAATGCGGTAACCGAT 393
||||.||||||| |||| || ||| .|||||||||.|..|||
RBAM_034350__ 350 TTACAAGCCCGAAACAGGAGATTACCG------CAAATGCGGTCAAGGAT 393
BSNT_05684___ 394 ATGGCGTATCACTACCGCATGCTTGAAGCCATGGGCATTGCTGATCGCTC 443
|||||.|||||.||...||||||.||.||.|||||.||.||..|.||.||
RBAM_034350__ 394 ATGGCCTATCATTATGACATGCTGGACGCAATGGGTATCGCGAACCGTTC 443
BSNT_05684___ 444 CGTTATCAACATTCATATTGGCGGCGCTTACGG----AAATAAAGACACC 489
|||.||||||||.|||.|.||.||||||||||| |||.|||| |
RBAM_034350__ 444 CGTCATCAACATCCATGTCGGAGGCGCTTACGGTGACAAACAAAG----C 489
BSNT_05684___ 490 GCCACTGCACAATTTCATC-AAAATATAAAACAGCTGCCGCAGGAGATCA 538
| |.||...|..||||..| ..|||.|.|||.|.||.||..|.|..||||
RBAM_034350__ 490 G-CGCTTGGCCGTTTCCGCGTGAATCTGAAAGAACTTCCCGATGTCATCA 538
BSNT_05684___ 539 AAGAGCGGATGACACTTGAAAATGATGATAAAACATATACAACGGAAGAA 588
||.||||||||||..|.|||||.|||||||||||||||||..|.||.|||
RBAM_034350__ 539 AACAGCGGATGACTTTAGAAAACGATGATAAAACATATACGTCCGAGGAA 588
BSNT_05684___ 589 ACGCTTCAG-GTCTGTGAGCAGGAGGATGTTCCGTTTGTCTTTGACTTTC 637
||.| |||| ||.|||||.||.||.|...||||||||||.|||||.|.||
RBAM_034350__ 589 ACAC-TCAGTGTATGTGAACAAGAAGGCATTCCGTTTGTGTTTGATTATC 637
BSNT_05684___ 638 ATCATTTTTACGCCAATCCAGA-CGATCACGCCGACCTGAATGTAG---- 682
|.||||||||||||||||| || ||||.||||.| ||.|||
RBAM_034350__ 638 ACCATTTTTACGCCAATCC-GACCGATGACGCTG------ATTTAGATGA 680
BSNT_05684___ 683 CA--CTGCCCCGCATGATCAAAACGTGGGAGCGGATCGGCCTTCAGCCAA 730
|| ||.||.||.|||||||||||.|||.|||||||||||.|..||||.|
RBAM_034350__ 681 CATTCTTCCGCGGATGATCAAAACATGGCAGCGGATCGGCTTAAAGCCGA 730
BSNT_05684___ 731 AGGTTCACTTGTCTTCCCCAAAATCGGAACAAGCGATACGCAGCCATGCC 780
||||.||..|.||.||.||||||||.|||..|||.||||||||.|||||.
RBAM_034350__ 731 AGGTCCATCTCTCCTCGCCAAAATCAGAATCAGCCATACGCAGTCATGCG 780
BSNT_05684___ 781 GATTATGTTGACGCCAACTTTTTGCTGCCGCTGTTGGAACGCTTTAGGCA 830
||.|||||.||.||.||.|||.|.||||||.||.||||.||.||.||.||
RBAM_034350__ 781 GACTATGTGGATGCGAATTTTATTCTGCCGGTGCTGGAGCGGTTCAGACA 830
BSNT_05684___ 831 ATGGGGAACGAATATTGATTTCATGATTGAAGC-AAAGCAGAAAGACAAG 879
|||||..|||.|.||.|||||.||||||||.|| |||| ||||||||..|
RBAM_034350__ 831 ATGGGATACGGACATCGATTTTATGATTGAGGCGAAAG-AGAAAGACCGG 879
BSNT_05684___ 880 GCGCTTCTCC-GCTTGATGGATGAATTAAGCTCCATCCGCGGTGTCAAAC 928
|||||.|||| |||.| |.||.|||||||||.||||||||||.|||||||
RBAM_034350__ 880 GCGCTGCTCCGGCTCG-TCGAAGAATTAAGCGCCATCCGCGGAGTCAAAC 928
BSNT_05684___ 929 GCCTCGGGGGCGGTGCGCTGCAATGGAAATCATAA 963
||||.|.||||||.|.|||..|.|||||..|||||
RBAM_034350__ 929 GCCTGGCGGGCGGAGTGCTAAAGTGGAAGGCATAA 963
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