Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05675 and RBAM_034300

See Amino acid alignment / Visit BSNT_05675 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence dna-align/BSNT_05675___ywjG.1.9828.seq
#    -bsequence dna-align/RBAM_034300___ywjG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05675___ywjG-RBAM_034300___ywjG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05675___ywjG-RBAM_034300___ywjG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05675___ywjG
# 2: RBAM_034300___ywjG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 530
# Identity:     409/530 (77.2%)
# Similarity:   409/530 (77.2%)
# Gaps:          16/530 ( 3.0%)
# Score: 1541.0
# 
#
#=======================================

BSNT_05675___      1 ATGTTGAAAATATTCACGACGCAGTTAACAGGTATTTTTTCCCGCATTCA     50
                     |||||.||.|||||.||.||||||.|..||||.|||||||||||||||||
RBAM_034300__      1 ATGTTAAAGATATTTACAACGCAGCTTGCAGGCATTTTTTCCCGCATTCA     50

BSNT_05675___     51 GGATAAGGAATCTGACGCGATTGAAGATGGGGCGCGGCTGCTTGCTCAAG    100
                     ||||||||||||.||.||.||.|||||.||.|||||.|||||.||.||.|
RBAM_034300__     51 GGATAAGGAATCCGAAGCAATAGAAGACGGCGCGCGCCTGCTGGCGCAGG    100

BSNT_05675___    101 CGGTGATCAGCGGGCATTCCATTTATTTATACGGAGCGAATGAGCTTCAG    150
                     |.|...|||||||.|||.||||||||||||||||.||.||||||.|.|||
RBAM_034300__    101 CAGCCGTCAGCGGTCATACCATTTATTTATACGGCGCAAATGAGATGCAG    150

BSNT_05675___    151 GGCGTCTTTTTTGAGGCCACCGAAA----GCAAAGAACCCTTCCCATCTG    196
                     |||.|.||.|..||||    ||.||    ||..||||||..|.||.||.|
RBAM_034300__    151 GGCATTTTGTGCGAGG----CGGAACTCGGCTCAGAACCGATGCCTTCCG    196

BSNT_05675___    197 TCAAAGCCTTTCCAGAAAGCGCTGA--GGAAGTGACAGAAAGCGACAGGG    244
                     |||||||.|||||.||.|..|||||  .||  |.||||||||||||||||
RBAM_034300__    197 TCAAAGCGTTTCCGGATACAGCTGATTCGA--TTACAGAAAGCGACAGGG    244

BSNT_05675___    245 TGCTGATGTTTTGTTCAGGGACGGGCACAGCCGAAGAACAGGCGCTCGCA    294
                     |||||||||||||||||||..|||||||.||.||||||||||||||.||.
RBAM_034300__    245 TGCTGATGTTTTGTTCAGGTCCGGGCACGGCTGAAGAACAGGCGCTGGCT    294

BSNT_05675___    295 AAAGAGCTTTATGAAAAAGGTGCGGGAGTCGTATGCGTATCGCCCG-CAG    343
                     .||.||||||||||||||||....||..||||..|||||||.||.| || 
RBAM_034300__    295 CAAAAGCTTTATGAAAAAGGGATCGGCCTCGTTGGCGTATCTCCTGTCA-    343

BSNT_05675___    344 CCAAAGA-CAGTGCGGGAATAGAACAGTATTGTGATGTGCATATTGATTC    392
                     .|||||| ||...|||| ||.||..|.|.|||||||||.||||||||...
RBAM_034300__    344 TCAAAGATCAAACCGGG-ATTGAGGAATTTTGTGATGTTCATATTGACAG    392

BSNT_05675___    393 TAAATTAAAAATGCCGCTTGTTCCCGATGAAGACGGCACCCGTTACGGGT    442
                     .||||||||||||||||||.|.||.|||||||||||.||..|.|||||.|
RBAM_034300__    393 CAAATTAAAAATGCCGCTTCTGCCTGATGAAGACGGGACAAGATACGGCT    442

BSNT_05675___    443 TTCCCTCTTTAATGACAGCACTGTATGTCTATCACGCTTTATCGTTTACA    492
                     ||||.||.||||||||||..|||||||||||||||||..|.||.|||||.
RBAM_034300__    443 TTCCTTCATTAATGACAGGCCTGTATGTCTATCACGCACTGTCCTTTACG    492

BSNT_05675___    493 CTAAAAGAAATTCTGCAAGAGTATGCATAA    522
                     .||||.|||||..||||.||.|||||.|.|
RBAM_034300__    493 TTAAAGGAAATGATGCAGGAATATGCCTGA    522


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