Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05671 and RBAM_034280

See Amino acid alignment / Visit BSNT_05671 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence dna-align/BSNT_05671___fbaA.1.9828.seq
#    -bsequence dna-align/RBAM_034280___fbaA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05671___fbaA-RBAM_034280___fbaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05671___fbaA-RBAM_034280___fbaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05671___fbaA
# 2: RBAM_034280___fbaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity:     781/858 (91.0%)
# Similarity:   781/858 (91.0%)
# Gaps:           0/858 ( 0.0%)
# Score: 3597.0
# 
#
#=======================================

BSNT_05671___      1 ATGCCTTTAGTTTCTATGACGGAAATGTTGAATACAGCTAAAGAAAAAGG     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_034280__      1 ATGCCTTTAGTTTCAATGACGGAAATGTTGAATACAGCTAAAGAAAAAGG     50

BSNT_05671___     51 GTACGCTGTAGGACAATTTAACTTAAACAACCTTGAGTTTACTCAAGCGA    100
                     .||.|||||.||||||||||||.||||.|||||||||||.||||||||.|
RBAM_034280__     51 ATATGCTGTTGGACAATTTAACCTAAATAACCTTGAGTTCACTCAAGCTA    100

BSNT_05671___    101 TTTTACAAGCAGCTGAAGAAGAAAAATCTCCAGTGATCCTTGGTGTTTCC    150
                     |||||||||||||.|||||.||||||||.||.||.||.|||||||||||.
RBAM_034280__    101 TTTTACAAGCAGCAGAAGAGGAAAAATCCCCGGTTATTCTTGGTGTTTCA    150

BSNT_05671___    151 GAAGGTGCGGGACGCTACATGGGCGGCTTCAAAACAGTCGTTGCTATGGT    200
                     |||||.||||||||||||||||||||||||||||||||.|||||.|||||
RBAM_034280__    151 GAAGGCGCGGGACGCTACATGGGCGGCTTCAAAACAGTGGTTGCCATGGT    200

BSNT_05671___    201 AAAAGCACTTATGGAAGAGTACAAAGTGACAGTTCCTGTTGCGATTCACT    250
                     .|||||.|||||||||||.||||||||||||||||||||.||.|||||||
RBAM_034280__    201 TAAAGCTCTTATGGAAGAATACAAAGTGACAGTTCCTGTCGCCATTCACT    250

BSNT_05671___    251 TAGACCACGGTTCAAGCTTTGAATCTTGTGCGAAAGCGATTCATGCAGGT    300
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
RBAM_034280__    251 TAGACCACGGTTCAAGCTTTGAATCTTGTGCGAAAGCGATTCATGCAGGC    300

BSNT_05671___    301 TTCACATCTGTAATGATCGACGCTTCTCACCATCCATTTGAAGAAAACGT    350
                     |||||.|||||||||||||||||.||||||||.||.|||||.||||||||
RBAM_034280__    301 TTCACTTCTGTAATGATCGACGCATCTCACCACCCGTTTGAGGAAAACGT    350

BSNT_05671___    351 AGCAACAACTGCTAAAGTTGTTGAGCTTGCTCATTTCCACGGAGTATCTG    400
                     ||||||.||.||||||||.|||||||||||||||||||||||.||.||.|
RBAM_034280__    351 AGCAACTACAGCTAAAGTGGTTGAGCTTGCTCATTTCCACGGCGTTTCAG    400

BSNT_05671___    401 TAGAAGCTGAGCTTGGAACAGTAGGCGGACAAGAAGATGACGTTATCGCT    450
                     |.|||||||||||||||||.|||||||||||.|||||||||||.||||||
RBAM_034280__    401 TTGAAGCTGAGCTTGGAACTGTAGGCGGACAGGAAGATGACGTGATCGCT    450

BSNT_05671___    451 GAAGGCGTAATTTACGCTGATCCTAAAGAGTGCCAAGAGCTTGTTGAGCG    500
                     |||||||||||.||.|||||.|||||||||||.|||||.|||||.|||||
RBAM_034280__    451 GAAGGCGTAATCTATGCTGACCCTAAAGAGTGTCAAGAACTTGTAGAGCG    500

BSNT_05671___    501 CACTGGCATCGACTGCCTTGCACCTGCATTAGGTTCTGTTCACGGCCCTT    550
                     ||||||||||||||||||||||||||||.|.|||||||||||||||||||
RBAM_034280__    501 CACTGGCATCGACTGCCTTGCACCTGCACTGGGTTCTGTTCACGGCCCTT    550

BSNT_05671___    551 ACAAAGGTGAGCCAAACCTTGGCTTCAAAGAAATGGAAGAGATCGGAAAA    600
                     |||||||.||.||.|||||.||.|||||||||||||||||.|||||.|||
RBAM_034280__    551 ACAAAGGCGAACCGAACCTCGGTTTCAAAGAAATGGAAGATATCGGCAAA    600

BSNT_05671___    601 TCAACTGGTCTTCCGCTAGTTCTTCACGGCGGTACTGGAATTCCGACTGC    650
                     |||||.||.|||||..||||.||||||||||||||.||||||||||||||
RBAM_034280__    601 TCAACCGGCCTTCCATTAGTACTTCACGGCGGTACAGGAATTCCGACTGC    650

BSNT_05671___    651 TGACATCAAAAAATCAATTTCACTTGGTACAGCTAAAATCAACGTGAATA    700
                     .|||||.|||||||||||.|||||||||||.||||||||||||||.||.|
RBAM_034280__    651 CGACATTAAAAAATCAATCTCACTTGGTACGGCTAAAATCAACGTAAACA    700

BSNT_05671___    701 CTGAAAACCAAATTTCTTCTGCAAAAGCTGTTCGCGAAACATTGGCAGCT    750
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
RBAM_034280__    701 CTGAAAACCAAATTTCTTCTGCAAAAGCTGTCCGCGAAACATTGGCAGCT    750

BSNT_05671___    751 AAGCCTGACGAGTACGATCCACGTAAATACCTTGGACCAGCTCGTGAAGC    800
                     |||||..||||.||||||||.||||||||.||||||||.|||||||||||
RBAM_034280__    751 AAGCCGAACGAATACGATCCTCGTAAATATCTTGGACCTGCTCGTGAAGC    800

BSNT_05671___    801 GATCAAAGAAACAGTTATCGGTAAAATGCGTGAATTTGGTTCTTCAAACC    850
                     ||||||||||||.||||||||.|||||||||||.||.|||||||||||||
RBAM_034280__    801 GATCAAAGAAACGGTTATCGGCAAAATGCGTGAGTTCGGTTCTTCAAACC    850

BSNT_05671___    851 AAGCTTAA    858
                     ||||||||
RBAM_034280__    851 AAGCTTAA    858


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