Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05671 and RBAM_034280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:10
# Commandline: needle
# -asequence dna-align/BSNT_05671___fbaA.1.9828.seq
# -bsequence dna-align/RBAM_034280___fbaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05671___fbaA-RBAM_034280___fbaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05671___fbaA-RBAM_034280___fbaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05671___fbaA
# 2: RBAM_034280___fbaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity: 781/858 (91.0%)
# Similarity: 781/858 (91.0%)
# Gaps: 0/858 ( 0.0%)
# Score: 3597.0
#
#
#=======================================
BSNT_05671___ 1 ATGCCTTTAGTTTCTATGACGGAAATGTTGAATACAGCTAAAGAAAAAGG 50
||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_034280__ 1 ATGCCTTTAGTTTCAATGACGGAAATGTTGAATACAGCTAAAGAAAAAGG 50
BSNT_05671___ 51 GTACGCTGTAGGACAATTTAACTTAAACAACCTTGAGTTTACTCAAGCGA 100
.||.|||||.||||||||||||.||||.|||||||||||.||||||||.|
RBAM_034280__ 51 ATATGCTGTTGGACAATTTAACCTAAATAACCTTGAGTTCACTCAAGCTA 100
BSNT_05671___ 101 TTTTACAAGCAGCTGAAGAAGAAAAATCTCCAGTGATCCTTGGTGTTTCC 150
|||||||||||||.|||||.||||||||.||.||.||.|||||||||||.
RBAM_034280__ 101 TTTTACAAGCAGCAGAAGAGGAAAAATCCCCGGTTATTCTTGGTGTTTCA 150
BSNT_05671___ 151 GAAGGTGCGGGACGCTACATGGGCGGCTTCAAAACAGTCGTTGCTATGGT 200
|||||.||||||||||||||||||||||||||||||||.|||||.|||||
RBAM_034280__ 151 GAAGGCGCGGGACGCTACATGGGCGGCTTCAAAACAGTGGTTGCCATGGT 200
BSNT_05671___ 201 AAAAGCACTTATGGAAGAGTACAAAGTGACAGTTCCTGTTGCGATTCACT 250
.|||||.|||||||||||.||||||||||||||||||||.||.|||||||
RBAM_034280__ 201 TAAAGCTCTTATGGAAGAATACAAAGTGACAGTTCCTGTCGCCATTCACT 250
BSNT_05671___ 251 TAGACCACGGTTCAAGCTTTGAATCTTGTGCGAAAGCGATTCATGCAGGT 300
|||||||||||||||||||||||||||||||||||||||||||||||||.
RBAM_034280__ 251 TAGACCACGGTTCAAGCTTTGAATCTTGTGCGAAAGCGATTCATGCAGGC 300
BSNT_05671___ 301 TTCACATCTGTAATGATCGACGCTTCTCACCATCCATTTGAAGAAAACGT 350
|||||.|||||||||||||||||.||||||||.||.|||||.||||||||
RBAM_034280__ 301 TTCACTTCTGTAATGATCGACGCATCTCACCACCCGTTTGAGGAAAACGT 350
BSNT_05671___ 351 AGCAACAACTGCTAAAGTTGTTGAGCTTGCTCATTTCCACGGAGTATCTG 400
||||||.||.||||||||.|||||||||||||||||||||||.||.||.|
RBAM_034280__ 351 AGCAACTACAGCTAAAGTGGTTGAGCTTGCTCATTTCCACGGCGTTTCAG 400
BSNT_05671___ 401 TAGAAGCTGAGCTTGGAACAGTAGGCGGACAAGAAGATGACGTTATCGCT 450
|.|||||||||||||||||.|||||||||||.|||||||||||.||||||
RBAM_034280__ 401 TTGAAGCTGAGCTTGGAACTGTAGGCGGACAGGAAGATGACGTGATCGCT 450
BSNT_05671___ 451 GAAGGCGTAATTTACGCTGATCCTAAAGAGTGCCAAGAGCTTGTTGAGCG 500
|||||||||||.||.|||||.|||||||||||.|||||.|||||.|||||
RBAM_034280__ 451 GAAGGCGTAATCTATGCTGACCCTAAAGAGTGTCAAGAACTTGTAGAGCG 500
BSNT_05671___ 501 CACTGGCATCGACTGCCTTGCACCTGCATTAGGTTCTGTTCACGGCCCTT 550
||||||||||||||||||||||||||||.|.|||||||||||||||||||
RBAM_034280__ 501 CACTGGCATCGACTGCCTTGCACCTGCACTGGGTTCTGTTCACGGCCCTT 550
BSNT_05671___ 551 ACAAAGGTGAGCCAAACCTTGGCTTCAAAGAAATGGAAGAGATCGGAAAA 600
|||||||.||.||.|||||.||.|||||||||||||||||.|||||.|||
RBAM_034280__ 551 ACAAAGGCGAACCGAACCTCGGTTTCAAAGAAATGGAAGATATCGGCAAA 600
BSNT_05671___ 601 TCAACTGGTCTTCCGCTAGTTCTTCACGGCGGTACTGGAATTCCGACTGC 650
|||||.||.|||||..||||.||||||||||||||.||||||||||||||
RBAM_034280__ 601 TCAACCGGCCTTCCATTAGTACTTCACGGCGGTACAGGAATTCCGACTGC 650
BSNT_05671___ 651 TGACATCAAAAAATCAATTTCACTTGGTACAGCTAAAATCAACGTGAATA 700
.|||||.|||||||||||.|||||||||||.||||||||||||||.||.|
RBAM_034280__ 651 CGACATTAAAAAATCAATCTCACTTGGTACGGCTAAAATCAACGTAAACA 700
BSNT_05671___ 701 CTGAAAACCAAATTTCTTCTGCAAAAGCTGTTCGCGAAACATTGGCAGCT 750
|||||||||||||||||||||||||||||||.||||||||||||||||||
RBAM_034280__ 701 CTGAAAACCAAATTTCTTCTGCAAAAGCTGTCCGCGAAACATTGGCAGCT 750
BSNT_05671___ 751 AAGCCTGACGAGTACGATCCACGTAAATACCTTGGACCAGCTCGTGAAGC 800
|||||..||||.||||||||.||||||||.||||||||.|||||||||||
RBAM_034280__ 751 AAGCCGAACGAATACGATCCTCGTAAATATCTTGGACCTGCTCGTGAAGC 800
BSNT_05671___ 801 GATCAAAGAAACAGTTATCGGTAAAATGCGTGAATTTGGTTCTTCAAACC 850
||||||||||||.||||||||.|||||||||||.||.|||||||||||||
RBAM_034280__ 801 GATCAAAGAAACGGTTATCGGCAAAATGCGTGAGTTCGGTTCTTCAAACC 850
BSNT_05671___ 851 AAGCTTAA 858
||||||||
RBAM_034280__ 851 AAGCTTAA 858
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