Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05661 and RBAM_034230

See Amino acid alignment / Visit BSNT_05661 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:09
# Commandline: needle
#    -asequence dna-align/BSNT_05661___rpmE.1.9828.seq
#    -bsequence dna-align/RBAM_034230___rpmE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05661___rpmE-RBAM_034230___rpmE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05661___rpmE-RBAM_034230___rpmE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05661___rpmE
# 2: RBAM_034230___rpmE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity:     200/201 (99.5%)
# Similarity:   200/201 (99.5%)
# Gaps:           0/201 ( 0.0%)
# Score: 996.0
# 
#
#=======================================

BSNT_05661___      1 ATGAAAGCAGGAATTCATCCTAATTTCAAAAAAGCAACAGTTAAATGCGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034230__      1 ATGAAAGCAGGAATTCATCCTAATTTCAAAAAAGCAACAGTTAAATGCGC     50

BSNT_05661___     51 TTGCGGAAATGAATTTGAAACAGGCTCAGTAAAAGAAGAGGTACGCGTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034230__     51 TTGCGGAAATGAATTTGAAACAGGCTCAGTAAAAGAAGAGGTACGCGTTG    100

BSNT_05661___    101 AGATTTGCTCTGAATGCCACCCATTCTACACTGGCCGTCAAAAATTCGCT    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_034230__    101 AGATTTGCTCTGAATGCCACCCATTCTACACTGGACGTCAAAAATTCGCT    150

BSNT_05661___    151 TCTGCTGATGGTCGTGTTGATCGCTTTAACAAAAAATACGGTCTTAAGTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034230__    151 TCTGCTGATGGTCGTGTTGATCGCTTTAACAAAAAATACGGTCTTAAGTA    200

BSNT_05661___    201 A    201
                     |
RBAM_034230__    201 A    201


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