Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05638 and RBAM_034070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:08
# Commandline: needle
# -asequence dna-align/BSNT_05638___ywlG.1.9828.seq
# -bsequence dna-align/RBAM_034070___ywlG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05638___ywlG-RBAM_034070___ywlG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05638___ywlG-RBAM_034070___ywlG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05638___ywlG
# 2: RBAM_034070___ywlG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 556
# Identity: 412/556 (74.1%)
# Similarity: 412/556 (74.1%)
# Gaps: 26/556 ( 4.7%)
# Score: 1480.0
#
#
#=======================================
BSNT_05638___ 1 ATGAATGAGTTGAAACAAACGTGGA-AGACGATGCTGTCTGAGTTTCAGG 49
|||.|.|||.||||.||||..|||| .||| ||||||.||||||||||.|
RBAM_034070__ 1 ATGGAAGAGATGAAGCAAAAATGGACGGAC-ATGCTGACTGAGTTTCAAG 49
BSNT_05638___ 50 ACCAAGCGGAATTGAAACAAGATCAGCTCT--TCGTCCTTGGATGCAGCA 97
|.||.||.|.|.|||...|.| .|||| || |.||..|.||.|||||.|
RBAM_034070__ 50 AGCAGGCAGGACTGACGGACG-GCAGC-CTGCTGGTGATCGGGTGCAGTA 97
BSNT_05638___ 98 CGAGCGAAGTGGCCGGCAGCCGGATCGGCACATCGGGCAGTGTAGATATC 147
|.||.||||..|||||.||||||||||||||..|.||.||.|..|||...
RBAM_034070__ 98 CAAGTGAAGCCGCCGGAAGCCGGATCGGCACCGCCGGAAGCGGGGATTGG 147
BSNT_05638___ 148 GCTGAAAGCATCTACAGCGGACTTGCTGAGCTCCG------GGAAAAAAC 191
||||||...||.|||.|||||||| ..||| |||||||||
RBAM_034070__ 148 GCTGAATTGATATACGGCGGACTT------AACCGGTTTAAGGAAAAAAC 191
BSNT_05638___ 192 GGGAATCCATCTGGCGTTTCAATGCTGCGAGCATTTAAACAGAGCGCTTG 241
|||..|.|||||.||.||||||||||||||||||||||||||.|||||.|
RBAM_034070__ 192 GGGTGTGCATCTTGCTTTTCAATGCTGCGAGCATTTAAACAGGGCGCTGG 241
BSNT_05638___ 242 TCGTCGAAGCAGAAACAGCCAAGCTGTTCAGGCTTCCAACCGTTTCTGCC 291
||.|.|||||.|||||.|||.|||.|||||||||.||.|..|||||.|||
RBAM_034070__ 242 TCATTGAAGCGGAAACGGCCGAGCGGTTCAGGCTCCCCATTGTTTCAGCC 291
BSNT_05638___ 292 GTGCCCGTTCCAAAAGCGGGCGGAGCGATGGCGTCTTATGCGTTTAAGCA 341
||.|||||.||.||||||||||||||.|||||.||||||||.|....|||
RBAM_034070__ 292 GTCCCCGTCCCGAAAGCGGGCGGAGCAATGGCCTCTTATGCATACCGGCA 341
BSNT_05638___ 342 GATGAAGTCTCCTGTTCTTGTTGAAACCATTCAGGCTGACGCCGGAATTG 391
||||...|||||.||.||.|..|||.|.|||||||||||.|||||.||||
RBAM_034070__ 342 GATGCGTTCTCCCGTGCTCGCCGAATCGATTCAGGCTGATGCCGGGATTG 391
BSNT_05638___ 392 ATATAGGCGATACGTTTATCGGCATGCATCTGAAGCCGGTGGCTGTCCCT 441
|.||.|||||||||||.|||||||||||||||||.||.||.||.||||||
RBAM_034070__ 392 ACATCGGCGATACGTTCATCGGCATGCATCTGAAACCCGTTGCCGTCCCT 441
BSNT_05638___ 442 GTGCGTGTCTCTCAAAAC----AGCCTCGGTTCAGCTCATGTGACATTGG 487
||.||..|.|| ||.| || ||.||...|||.||||||||..|||
RBAM_034070__ 442 GTCCGGATATC---AAGCCGTGAG-CTTGGAGAAGCACATGTGACGATGG 487
BSNT_05638___ 488 CGCGTACACGGCCGAAACTAATCGGCGGAGTGCGGGCGGTTTATGAGTGT 537
|.||.|||.|||||||.||.||.||||||.|.||.||.||||||||.||.
RBAM_034070__ 488 CCCGGACAAGGCCGAAGCTGATAGGCGGAATTCGCGCCGTTTATGAATGC 537
BSNT_05638___ 538 GAATGA 543
||||||
RBAM_034070__ 538 GAATGA 543
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