Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05629 and RBAM_034020

See Amino acid alignment / Visit BSNT_05629 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence dna-align/BSNT_05629___atpE.1.9828.seq
#    -bsequence dna-align/RBAM_034020___atpE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05629___atpE-RBAM_034020___atpE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05629___atpE-RBAM_034020___atpE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05629___atpE
# 2: RBAM_034020___atpE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity:     200/213 (93.9%)
# Similarity:   200/213 (93.9%)
# Gaps:           0/213 ( 0.0%)
# Score: 948.0
# 
#
#=======================================

BSNT_05629___      1 ATGAATTTAATAGCAGCTGCGATTGCAATTGGTTTAGGCGCACTTGGTGC     50
                     ||||||||||||||||||||.||||||||.||||||||.|||||||||||
RBAM_034020__      1 ATGAATTTAATAGCAGCTGCAATTGCAATCGGTTTAGGTGCACTTGGTGC     50

BSNT_05629___     51 AGGTATTGGTAACGGTTTGATTGTTTCACGTACGGTAGAGGGGATTGCCC    100
                     ||||||||||||||||.||||.||||||||||||||||||||.||.||||
RBAM_034020__     51 AGGTATTGGTAACGGTCTGATCGTTTCACGTACGGTAGAGGGAATCGCCC    100

BSNT_05629___    101 GTCAGCCGGAAGCAGGTAAAGAACTGAGAACTCTTATGTTCATGGGTATC    150
                     ||||||||||||||||.||||||||.||||||||||||||||||||||||
RBAM_034020__    101 GTCAGCCGGAAGCAGGAAAAGAACTTAGAACTCTTATGTTCATGGGTATC    150

BSNT_05629___    151 GCATTAGTTGAAGCCCTTCCTATTATCGCTGTCGTTATCGCATTCTTAGC    200
                     |||||.|||||.||||||||.||||||||||||||||||||.||||||||
RBAM_034020__    151 GCATTGGTTGAGGCCCTTCCGATTATCGCTGTCGTTATCGCGTTCTTAGC    200

BSNT_05629___    201 GTTCTTTGGCTAA    213
                     |||||||||||||
RBAM_034020__    201 GTTCTTTGGCTAA    213


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.