Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05620 and RBAM_033960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence dna-align/BSNT_05620___atpC.1.9828.seq
# -bsequence dna-align/RBAM_033960___atpC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05620___atpC-RBAM_033960___atpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05620___atpC-RBAM_033960___atpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05620___atpC
# 2: RBAM_033960___atpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 407
# Identity: 349/407 (85.7%)
# Similarity: 349/407 (85.7%)
# Gaps: 16/407 ( 3.9%)
# Score: 1531.0
#
#
#=======================================
BSNT_05620___ 1 ATGAAGACCGTTAAAGTCAATATCGTTACTCCCGACGGCCCAGTATACGA 50
|||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_033960__ 1 ATGAAGACCGTTAAAGTCAATATCGTTACTCCCGACGGCCCAGTATATGA 50
BSNT_05620___ 51 TGCGGATATCGAAATGGTGAGTGTGAGAGCCGAAAGCGGCGATCTCGGTA 100
|||.|||||.||||||||.|||||.||||||||.|||||.||||||||||
RBAM_033960__ 51 TGCTGATATTGAAATGGTAAGTGTAAGAGCCGAGAGCGGTGATCTCGGTA 100
BSNT_05620___ 101 TTTTGCCAGGCCATATTCCAACCGTGGCTCCTCTTAAAATCGGCGCTGTC 150
|.|||||.|||||||||||.|||||||||||.||||||||||||||||||
RBAM_033960__ 101 TCTTGCCTGGCCATATTCCGACCGTGGCTCCGCTTAAAATCGGCGCTGTC 150
BSNT_05620___ 151 CGTCTGAAAAAAGACGGGCAGACTGAAATGGTTGCCGTCAGCGGCGGATT 200
||.||.|||||||||||.|||||.|||.|||..||.||||||||||||||
RBAM_033960__ 151 CGCCTTAAAAAAGACGGACAGACCGAATTGGCGGCTGTCAGCGGCGGATT 200
BSNT_05620___ 201 TGTCGAAGTCCGTCCTGATCAGGTCACCATCCTTGCCCAGGCTGCCGAGA 250
|.|.|||||||||||||||||||||||.||||||||.||.||.||.||.|
RBAM_033960__ 201 TTTAGAAGTCCGTCCTGATCAGGTCACTATCCTTGCACAAGCCGCTGAAA 250
BSNT_05620___ 251 CAGCGGAAGGCATCGATAAAGAGCGCGCTGAAGCTGC----ACGCCAGCG 296
||||||||.||||.||||||||||||||....||||| | ||||
RBAM_033960__ 251 CAGCGGAAAGCATTGATAAAGAGCGCGCCCTTGCTGCGAAAA----AGCG 296
BSNT_05620___ 297 GGCGCAGGAGCGTTTGAATTCTCA----ATCAGATGATACTGACATTCGT 342
||||.|.||.|||||||| || ||||||||||||||||||||||
RBAM_033960__ 297 GGCGGAAGACCGTTTGAA----CAAACGATCAGATGATACTGACATTCGT 342
BSNT_05620___ 343 CGGGCTGAGCTTGCGTTACAGCGGGCTTTGAACAGATTGGATGTAGCAGG 392
|||||||||||||||.|||||||||||.|.||||||||||||||.|||||
RBAM_033960__ 343 CGGGCTGAGCTTGCGCTACAGCGGGCTGTAAACAGATTGGATGTTGCAGG 392
BSNT_05620___ 393 GAAATAA 399
.||.|||
RBAM_033960__ 393 AAACTAA 399
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