Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05616 and RBAM_033920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:06
# Commandline: needle
# -asequence dna-align/BSNT_05616___murAA.1.9828.seq
# -bsequence dna-align/RBAM_033920___murAA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05616___murAA-RBAM_033920___murAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05616___murAA-RBAM_033920___murAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05616___murAA
# 2: RBAM_033920___murAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1316
# Identity: 1137/1316 (86.4%)
# Similarity: 1137/1316 (86.4%)
# Gaps: 10/1316 ( 0.8%)
# Score: 4985.0
#
#
#=======================================
BSNT_05616___ 1 TTGGAAAAAATCATCGTCCGCGGCGGTCAGAAGTTAAACGGCACAGTCAA 50
|||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_033920__ 1 TTGGAAAAAATCATCGTCCGCGGCGGTCAGAAGTTAAACGGCACAGTGAA 50
BSNT_05616___ 51 AGTTGAAGGCGCTAAAAATGCCGTTTTACCTGTTATCGCTGCATCTTTAT 100
|||||||||.||.|||||||||||||||||.|||||||||||||||||||
RBAM_033920__ 51 AGTTGAAGGAGCAAAAAATGCCGTTTTACCAGTTATCGCTGCATCTTTAT 100
BSNT_05616___ 101 TAGCAAGTGAAGAAAAAAGCGTAATTTGTGATGTACCTACGCTCTCCGAT 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_033920__ 101 TAGCAAGTGAAGAAAAAAGCGTAATATGTGATGTACCTACGCTCTCCGAT 150
BSNT_05616___ 151 GTATATACAATTAACGAAGTGTTGCGTCATTTAGGAGCAGATGTGCATTT 200
||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_033920__ 151 GTATATACAATTAATGAAGTGTTGCGTCATTTAGGAGCAGATGTGCATTT 200
BSNT_05616___ 201 TGAAAATAATGAAGTGACTGTAAATGCTTCATACGCTTTGCAAACTGAAG 250
|||.|||||||||||.||.|||||.|||||.||||||||..||||.||||
RBAM_033920__ 201 TGAGAATAATGAAGTTACCGTAAACGCTTCTTACGCTTTAGAAACAGAAG 250
BSNT_05616___ 251 CACCTTTTGAATATGTTCGTAAAATGCGTGCGTCTGTGCTTGTCATGGGG 300
||||||||||||||||.||.||||||||.|||||.||||||||.|||||.
RBAM_033920__ 251 CACCTTTTGAATATGTGCGCAAAATGCGCGCGTCAGTGCTTGTTATGGGC 300
BSNT_05616___ 301 CCGCTTCTTGCGCGTACAGGTCATGCAAGAGTTGCACTTCCGGGCGGATG 350
||.||..|.||.|||||.||||||.|||||||.||.|||||||||||.||
RBAM_033920__ 301 CCTCTGTTAGCCCGTACGGGTCATTCAAGAGTAGCGCTTCCGGGCGGCTG 350
BSNT_05616___ 351 CGCAATTGGTTCCAGACCGATTGATCAGCATTTAAAAGGTTTTGAAGCAA 400
||||||.||.||.||||||||||||||||||||||||||.||||||||||
RBAM_033920__ 351 CGCAATCGGCTCAAGACCGATTGATCAGCATTTAAAAGGCTTTGAAGCAA 400
BSNT_05616___ 401 TGGGCGCAGAAATCAAAGTCGGTAATGGCTTCATTGAAGCTGAAGTAAAA 450
||||.|||.||||||||||.||.||.|||||.||||||||.|||||..|.
RBAM_033920__ 401 TGGGTGCAAAAATCAAAGTAGGCAACGGCTTTATTGAAGCAGAAGTGGAG 450
BSNT_05616___ 451 GGCCGACTGCAAGGCGCAAAAATTTATCTGGACTTCCCAAGTGTAGGAGC 500
|||||.|||||.|||||||||||.|||.|.||.|||||||||||.||.||
RBAM_033920__ 451 GGCCGTCTGCAGGGCGCAAAAATCTATTTAGATTTCCCAAGTGTGGGTGC 500
BSNT_05616___ 501 TACAGAGAACCTGATTATGGCAGCCGCTCTAGCTGAAGGAACAACTACGC 550
.|||||.|||.|||||||||||||.|||.||||||||||||||||.||||
RBAM_033920__ 501 GACAGAAAACTTGATTATGGCAGCTGCTTTAGCTGAAGGAACAACAACGC 550
BSNT_05616___ 551 TGGAAAACGTGGCAAAAGAACCCGAAATCGTTGATTTAGCAAACTATATC 600
|.|||||||||||||||||.||.|||||||||||.|||||.|||||||||
RBAM_033920__ 551 TTGAAAACGTGGCAAAAGAGCCTGAAATCGTTGACTTAGCGAACTATATC 600
BSNT_05616___ 601 AACGGCATGGGCGGAAAAATCCGCGGAGCTGGCACCGGCACCATCAAAAT 650
||.|..|||||||||||||||||||||||.|||||.||||||||.|||||
RBAM_033920__ 601 AATGCGATGGGCGGAAAAATCCGCGGAGCCGGCACAGGCACCATTAAAAT 650
BSNT_05616___ 651 TGAAGGAGTCGAAAAGCTTCACGGCGTAAAACACCATATTATTCCTGACC 700
||||||.|||||.||||||||||||||||.||||.|.||.||||||||||
RBAM_033920__ 651 TGAAGGTGTCGAGAAGCTTCACGGCGTAAGACACAACATCATTCCTGACC 700
BSNT_05616___ 701 GCATTGAAGCGGGCACATTTATGGTTGCTGCTGCAATCACTGAAGGAAAC 750
|.|||||||||||.||.||.|||||.|||||.||.|||||.||||||||.
RBAM_033920__ 701 GTATTGAAGCGGGTACTTTCATGGTGGCTGCGGCTATCACGGAAGGAAAT 750
BSNT_05616___ 751 GTATTAGTAAAAGGAGCCGTTCCTGAACACCTCACCTCTTTAATTGCAAA 800
||||||||.|||||.||.||||||||.||.||.||.|||||||||||.||
RBAM_033920__ 751 GTATTAGTCAAAGGTGCGGTTCCTGAGCATCTTACGTCTTTAATTGCGAA 800
BSNT_05616___ 801 AATGGAAGAGATGGGTGTAACAATTAAGGATGAAGGTGAAGGTCTGCGTG 850
.||||||||.|||||.||.|.|||||.|||||||||.|||||.||.||||
RBAM_033920__ 801 GATGGAAGAAATGGGAGTCAAAATTACGGATGAAGGAGAAGGCCTTCGTG 850
BSNT_05616___ 851 TCATCG-----GCCCGAAAGAACTTAAACCGATTGACATCAAAACAATGC 895
|||||| |||| |.||.||.|||||.|||||.|||||.||||
RBAM_033920__ 851 TCATCGGTCCTGCCC-----AGCTGAAGCCGATCGACATTAAAACGATGC 895
BSNT_05616___ 896 CTCACCCGGGCTTCCCGACTGATATGCAGTCACAAATGATGGCGCTTCTG 945
|||||||.||.||||||||||||||||||||.||||||||||||||.||.
RBAM_033920__ 896 CTCACCCAGGATTCCCGACTGATATGCAGTCGCAAATGATGGCGCTGCTT 945
BSNT_05616___ 946 CTTCGTGCAAGCGGCACAAGCATGATTACAGAAACCGTTTTTGAAAACCG 995
||.|||||.|||||.||||||||||||||.|||||.||.|||||||||||
RBAM_033920__ 946 CTCCGTGCGAGCGGAACAAGCATGATTACTGAAACTGTGTTTGAAAACCG 995
BSNT_05616___ 996 TTTTATGCATGCGGAAGAATTCCGCCGTATGAATGGTGATATCAAGATTG 1045
||||||||||||.||||||||||||||.||||||||.||.||.||.||||
RBAM_033920__ 996 TTTTATGCATGCTGAAGAATTCCGCCGGATGAATGGCGACATTAAAATTG 1045
BSNT_05616___ 1046 AAGGACGTTCTGTCATCATTAACGGTCCTGTACAGCTTCAGGGAGCTGAA 1095
|||||||||||||.|||||||||||||||||||||||.||.||.||.|||
RBAM_033920__ 1046 AAGGACGTTCTGTGATCATTAACGGTCCTGTACAGCTGCAAGGCGCAGAA 1095
BSNT_05616___ 1096 GTTGCAGCGACTGATTTGCGTGCAGGTGCAGCGCTGATTCTTGCGGGGTT 1145
|||||.||.||.||..|||||||.||.||.|||||||||||||||||.||
RBAM_033920__ 1096 GTTGCCGCTACGGACCTGCGTGCGGGCGCGGCGCTGATTCTTGCGGGATT 1145
BSNT_05616___ 1146 AGTGGCTGAAGGTCACACACGTGTTACTGAATTGAAGCACTTAGACCGCG 1195
|||||||||||||||.|||||.||.||.|||.||||||||||.||.||||
RBAM_033920__ 1146 AGTGGCTGAAGGTCATACACGCGTCACGGAACTGAAGCACTTGGATCGCG 1195
BSNT_05616___ 1196 GTTACGTTGATTTCCATCAGAAGCTTGCCGCTCTGGGCGCAGACATCGAA 1245
||||.||..||||||||||.||.|||||.|||||.|||||.||||||||.
RBAM_033920__ 1196 GTTATGTGAATTTCCATCAAAAACTTGCGGCTCTCGGCGCTGACATCGAG 1245
BSNT_05616___ 1246 CGTGTAAATGATGAGTCTGCTTCTGAGCAAGAGAATAAAGAAGTCGTTTC 1295
|||||...||||||..|.||..||||.|||||.|.||||||||||||..|
RBAM_033920__ 1246 CGTGTCGTTGATGAAACGGCCGCTGAACAAGAAAGTAAAGAAGTCGTAAC 1295
BSNT_05616___ 1296 TGACTTAAATGCATAA 1311
||||.||||.||||||
RBAM_033920__ 1296 TGACCTAAACGCATAA 1311
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