Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05575 and RBAM_033690
See
Amino acid alignment /
Visit
BSNT_05575 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:04
# Commandline: needle
# -asequence dna-align/BSNT_05575___nrgB.1.9828.seq
# -bsequence dna-align/RBAM_033690___nrgB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05575___nrgB-RBAM_033690___nrgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05575___nrgB-RBAM_033690___nrgB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05575___nrgB
# 2: RBAM_033690___nrgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 286/351 (81.5%)
# Similarity: 286/351 (81.5%)
# Gaps: 0/351 ( 0.0%)
# Score: 1170.0
#
#
#=======================================
BSNT_05575___ 1 ATGAGCGGCCAAATGTTCAAGGTAGAAATTGTAACGCGTCCGGCAAATTT 50
||||||||.||||||||||||||||||||.||.|||||||||||.||.||
RBAM_033690__ 1 ATGAGCGGTCAAATGTTCAAGGTAGAAATCGTTACGCGTCCGGCTAAGTT 50
BSNT_05575___ 51 TGAAAAGCTGAAGCAGGAACTCGGAAAAATCGGAGTGACCTCTCTGACTT 100
|||||...||||.|||||||||||.|||||||||||.||.||.|||||.|
RBAM_033690__ 51 TGAAACATTGAAACAGGAACTCGGTAAAATCGGAGTCACATCGCTGACCT 100
BSNT_05575___ 101 TCTCCAATGTACACGGCTGCGGCCTTCAAAAAGCACATACGGAGCTCTAT 150
|||||||.||||||||||||||||||||||||||.||.||.||.||.||.
RBAM_033690__ 101 TCTCCAACGTACACGGCTGCGGCCTTCAAAAAGCCCACACCGAACTGTAC 150
BSNT_05575___ 151 CGAGGGGTAAAAATAGAAAGCAATGTATACGAGCGTTTAAAAATAGAAAT 200
||.||.||.|||||.|||||||||||.||.||.||..|.|||.|.|||||
RBAM_033690__ 151 CGCGGAGTCAAAATTGAAAGCAATGTGTATGAACGGCTGAAAGTGGAAAT 200
BSNT_05575___ 201 TGTGGTCAGCAAGGTTCCTGTTGATCAAGTGACTGAGACCGCTAAAAGGG 250
.||.|||||||||||.||.|||||||||||....||.||.||.||||..|
RBAM_033690__ 201 CGTTGTCAGCAAGGTCCCCGTTGATCAAGTCGTGGAAACGGCGAAAAAAG 250
BSNT_05575___ 251 TGCTGAAAACGGGATCACCGGGTGACGGTAAAATATTTGTCTATGAAATC 300
||||||||||||||...||.||.|||||.||||||||.||||||||||||
RBAM_033690__ 251 TGCTGAAAACGGGAGAGCCCGGAGACGGCAAAATATTCGTCTATGAAATC 300
BSNT_05575___ 301 AGCAATACGATCAACATCCGCACAGGCGAAGAAGGACCTGAAGCACTTTA 350
.|.||.|||||.||.||||||||.||.|||||||||||.|.|||..|.||
RBAM_033690__ 301 GGAAACACGATTAATATCCGCACCGGAGAAGAAGGACCAGGAGCTTTATA 350
BSNT_05575___ 351 A 351
|
RBAM_033690__ 351 A 351
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.