Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05574 and RBAM_033680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:04
# Commandline: needle
# -asequence dna-align/BSNT_05574___nrgA.1.9828.seq
# -bsequence dna-align/RBAM_033680___nrgA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05574___nrgA-RBAM_033680___nrgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05574___nrgA-RBAM_033680___nrgA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05574___nrgA
# 2: RBAM_033680___nrgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1219
# Identity: 978/1219 (80.2%)
# Similarity: 978/1219 (80.2%)
# Gaps: 11/1219 ( 0.9%)
# Score: 3909.5
#
#
#=======================================
BSNT_05574___ 1 ATGCAAATGGGCGATACAGTTTTTATGTTCTTTTGCGCTTTACTCGTGTG 50
|||||.||||||||||||||.|||||||||||||||||||||||||||||
RBAM_033680__ 1 ATGCAGATGGGCGATACAGTATTTATGTTCTTTTGCGCTTTACTCGTGTG 50
BSNT_05574___ 51 GCTGATGACCCCGGGATTAGCGTTATTTTATGGAGGAATGGTAAAGAGCA 100
||||||||||||.||..|.||.||.|||||.||.|||||||||||.||||
RBAM_033680__ 51 GCTGATGACCCCCGGGCTGGCTTTGTTTTACGGCGGAATGGTAAAAAGCA 100
BSNT_05574___ 101 AAAATGTGCTGAGTACTGCCATGCACAGTTTCTCTTCCATTGCCATCGTT 150
||||||||||.||.||.||.|||||.|||||.|||||..|.||||||||.
RBAM_033680__ 101 AAAATGTGCTCAGCACGGCGATGCATAGTTTTTCTTCTCTCGCCATCGTA 150
BSNT_05574___ 151 TCCATCGTTTGGGTGCTGTTCGGATATACACTTGCCTTCGCACCAGGCAA 200
|||.||||||||||..|||.|||||||.|||||||.||.||.||.|||||
RBAM_033680__ 151 TCCGTCGTTTGGGTTTTGTACGGATATTCACTTGCTTTTGCCCCCGGCAA 200
BSNT_05574___ 201 TTCAATCATCGGCGGGCTGGAGTGGGCCGGCCTCAAAGGGGTCGGATTTG 250
|.||....|.||||||.|.||.||||||||.||.||.||||||||.||||
RBAM_033680__ 201 TACATGGCTTGGCGGGATTGAATGGGCCGGGCTGAAGGGGGTCGGCTTTG 250
BSNT_05574___ 251 ATCCGGGAGATTACAGCGATACCATCCCCCACTCGTTATTTATGATGTTC 300
|.||.|||..||||||.|||||.|||||.||.||.||.||.|||||||||
RBAM_033680__ 251 AACCCGGAAGTTACAGTGATACGATCCCGCATTCCTTGTTCATGATGTTC 300
BSNT_05574___ 301 CAAATGACGTTCGCCGTTCTGACTACAGCGATTATTTCCGGGGCTTTCGC 350
|||||||||||.|||||.|||||.||.||.|||||||||||.||.||.||
RBAM_033680__ 301 CAAATGACGTTTGCCGTACTGACAACGGCCATTATTTCCGGAGCATTTGC 350
BSNT_05574___ 351 AGAGCGGATGCGATTCGGCGCTTTTCTTTTATTCTCGGTTTTATGGGCCT 400
.||.||.|||.|||||.|.|||||||||.||||.||..||||.|||||.|
RBAM_033680__ 351 TGAACGCATGAGATTCAGTGCTTTTCTTGTATTTTCCTTTTTGTGGGCTT 400
BSNT_05574___ 401 CTTTGGTTTACACACCCGTAGCGCACTGGGTATGGGGCGGCGGCTGGATC 450
|..|.||.||.||.|||||.||||||||||||||||||||||||||||||
RBAM_033680__ 401 CCCTCGTATATACGCCCGTTGCGCACTGGGTATGGGGCGGCGGCTGGATC 450
BSNT_05574___ 451 GGCCAGCTTGGAGCGCTCGATTTCGCCGGCGGCAATGTTGTTCATATTTC 500
|||||..|.||.||.||.||.|||||.|||||.||.||.||.||.|||||
RBAM_033680__ 451 GGCCAAATGGGCGCTCTTGACTTCGCAGGCGGAAACGTCGTCCACATTTC 500
BSNT_05574___ 501 CTCCGGTGTGGCAGGACTTGTTCTTGCCATTGTGCTAGGCAAACGGAAAG 550
.|||||.||.||.||.|||||.||.||.||||||||.||.|||||.||.|
RBAM_033680__ 501 TTCCGGAGTCGCCGGGCTTGTGCTGGCGATTGTGCTCGGGAAACGCAAGG 550
BSNT_05574___ 551 ACGGCACAGCGTCTTCTCCGCATAACCTCATTTACACCTTCTTAGGAGGA 600
|||||||.|||.||||.||.||.|||.|.||||||||.|||||.||.|||
RBAM_033680__ 551 ACGGCACGGCGGCTTCGCCTCACAACTTAATTTACACGTTCTTGGGCGGA 600
BSNT_05574___ 601 GCTTTGATTTGGTTCGGCTGGTTCGGCTTTAACGTCGGCAGCGCTTTGAC 650
||..|.||.||||||||.|||||||||||.||.|||||.|||||..|.||
RBAM_033680__ 601 GCGCTCATCTGGTTCGGATGGTTCGGCTTCAATGTCGGAAGCGCCCTCAC 650
BSNT_05574___ 651 TTTAGATGGTGTAGCCATGTACGCGTTCATCAACACAAACACCGCGGCTG 700
..|.||..||.|.||.||||..||.|||||.|||||||||||||||||||
RBAM_033680__ 651 GCTTGACAGTATCGCGATGTTTGCCTTCATTAACACAAACACCGCGGCTG 700
BSNT_05574___ 701 CAGCCGGGATCGCCGGCTGGATCGTAGTAGAATGGATCATTAACAAAAAA 750
|||||||.||...|||||||||..||.|.||||||||..|.||.||||||
RBAM_033680__ 701 CAGCCGGAATTATCGGCTGGATTTTAATCGAATGGATGCTGAATAAAAAA 750
BSNT_05574___ 751 CCGACAATGCTCGGAGCGGTATCTGGCGCAATCGCCGGGCTTGTCGCCAT 800
|||||.|||||.||.||.|||||.|||||.||||||||||||||||||||
RBAM_033680__ 751 CCGACTATGCTGGGCGCTGTATCAGGCGCTATCGCCGGGCTTGTCGCCAT 800
BSNT_05574___ 801 TACGCCGGCTGCCGGATTTGTCACACCGTTCGCTTCCATTATTATCGGCA 850
|||||||||||||||.||.||.||.||||||.|||||||..|.|||||..
RBAM_033680__ 801 TACGCCGGCTGCCGGGTTCGTTACGCCGTTCTCTTCCATCGTAATCGGTT 850
BSNT_05574___ 851 TCATCGGCGGAGC-TGTTTGTTTCTGGGGAGTATTCTCGCTTAAAAAGAA 899
|||||||||| || |||.||.||.|||||.||.|..|.|||.|||||||.
RBAM_033680__ 851 TCATCGGCGG-GCTTGTCTGCTTTTGGGGCGTTTATTGGCTCAAAAAGAC 899
BSNT_05574___ 900 ATTCGGATACGACGACGCGCTTGACGCCTTTGGCCTGCACGGGATCGGCG 949
.|||||.||.||.||.|||||||||||.||.||||||||.||||||||||
RBAM_033680__ 900 TTTCGGTTATGATGATGCGCTTGACGCTTTCGGCCTGCATGGGATCGGCG 949
BSNT_05574___ 950 GCACATGGGGCGGAATCGCAACAGGATTATTCGCAACAACCTCTGTTAAC 999
|||||||||||||.|||||.||.||.||||||||.||.||.||.||.||
RBAM_033680__ 950 GCACATGGGGCGGCATCGCGACCGGTTTATTCGCCACCACTTCCGTCAA- 998
BSNT_05574___ 1000 T--CAGCGGGCGCAGATGGGTTATTTTACGGTGATGCAAGCTTAATCTGG 1047
| |.||||| |||.|.|||.|.||||||||.|||.|..|..|..|||||
RBAM_033680__ 999 TGACGGCGGG-GCAAACGGGCTGTTTTACGGCGATCCGGGACTGCTCTGG 1047
BSNT_05574___ 1048 AAACAAATCGTCGCCATCGCCGCCACTTATGTTTTTGTATTTATTGTCAC 1097
||.||.||.|..|||||.||.||.||.|||||.|||||||||||||||||
RBAM_033680__ 1048 AAGCAGATTGCGGCCATTGCGGCAACCTATGTATTTGTATTTATTGTCAC 1097
BSNT_05574___ 1098 TTTCGTTATTATTAAATTTGTAAGCCTCTTCCTTCCCCTTCGCGCAACCG 1147
|||||||||.||||||.|||||.|.||.|||.|||||||||||||.|..|
RBAM_033680__ 1098 TTTCGTTATCATTAAAATTGTAGGTCTGTTCATTCCCCTTCGCGCCAGTG 1147
BSNT_05574___ 1148 AAGAAGAAGAGTCACTTGGGCTTGACTTAACGATGCACGGGGAAAAAGCA 1197
|||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_033680__ 1148 AAGAAGAAGAGTCACTTGGGCTTGATTTAACGATGCACGGGGAAAAAGCA 1197
BSNT_05574___ 1198 TATCAAGA-TTCTATGTGA 1215
|||||.|| ||.||.
RBAM_033680__ 1198 TATCAGGACTTATAA---- 1212
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