Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05554 and RBAM_033570

See Amino acid alignment / Visit BSNT_05554 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:02
# Commandline: needle
#    -asequence dna-align/BSNT_05554___ywpB.1.9828.seq
#    -bsequence dna-align/RBAM_033570___fabZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05554___ywpB-RBAM_033570___fabZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05554___ywpB-RBAM_033570___fabZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05554___ywpB
# 2: RBAM_033570___fabZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity:     351/430 (81.6%)
# Similarity:   351/430 (81.6%)
# Gaps:           8/430 ( 1.9%)
# Score: 1448.0
# 
#
#=======================================

BSNT_05554___      1 ATGCTTGATACTCAGCAAATTAAAGAAATTATTCCTCACCGTTATCCGTT     50
                     |||||||||||||||||||||||||||||||||||.||.||.||||||||
RBAM_033570__      1 ATGCTTGATACTCAGCAAATTAAAGAAATTATTCCCCATCGCTATCCGTT     50

BSNT_05554___     51 TTTGCTTGTGGATCGGATTACGGAAGTTGAAGAGGGCAAACGGGCAAAAG    100
                     |.|.||.||.||..|.|||||||||||.|||||.||.||||||||    |
RBAM_033570__     51 TCTTCTGGTAGACAGAATTACGGAAGTCGAAGAAGGAAAACGGGC----G     96

BSNT_05554___    101 GC----TATAAAAATGTAACCGCTAATGAAGAGTTCTTTAACGGACATTT    146
                     ||    |||||||||||.||.||.||||||||.||.||.|||||.|||||
RBAM_033570__     97 GCGGGATATAAAAATGTGACGGCGAATGAAGATTTTTTCAACGGCCATTT    146

BSNT_05554___    147 TCCTCAGTACCCGGTTATGCCCGGCGTATTAATCGTAGAAGCACTCGCTC    196
                     |||..|.|||||.||||||||.|||||||||||||||||.||..|.||.|
RBAM_033570__    147 TCCCGAATACCCTGTTATGCCGGGCGTATTAATCGTAGAGGCTTTGGCGC    196

BSNT_05554___    197 AAGTCGGAGCTGTTGCGATGTTGATTAAAGAAGAAAACCGCGGCAGACTG    246
                     |.||||||||.|||||||||.|||||||||||||||||||.||||||||.
RBAM_033570__    197 AGGTCGGAGCAGTTGCGATGCTGATTAAAGAAGAAAACCGGGGCAGACTC    246

BSNT_05554___    247 GCTTTTTTTGCAGGCATTGATAACTGCCGCTTTAAAAAACAAGTCAAGCC    296
                     ||.||||||||.||.||||||||||||||.||.|||||.||.||.||.||
RBAM_033570__    247 GCATTTTTTGCGGGGATTGATAACTGCCGTTTCAAAAAGCAGGTAAAACC    296

BSNT_05554___    297 TGGTGACCAGCTTCACCTTGAGGTTGAAATCATTCGTGCCCGCGGCACAA    346
                     .||||||.||||..|.|||||||||||.||.|..||.||.|||||.||.|
RBAM_033570__    297 GGGTGACAAGCTGGAGCTTGAGGTTGATATTACCCGCGCGCGCGGTACGA    346

BSNT_05554___    347 TCGGGCGCGGAAAAGGCGTTGCCACAGTTGATGGCGAAGTCGTTTGCGAA    396
                     ||||.|||||.|||||||||||||.||||||.|||||..||||.||.|||
RBAM_033570__    347 TCGGACGCGGCAAAGGCGTTGCCAAAGTTGACGGCGAGCTCGTGTGTGAA    396

BSNT_05554___    397 GTAGAACTGACTTTTGCCCTCGGAGAATAA    426
                     |..|||.|.||.|||||.||||||||||||
RBAM_033570__    397 GCTGAATTAACCTTTGCGCTCGGAGAATAA    426


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