Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05510 and RBAM_033300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence dna-align/BSNT_05510___ywrA.1.9828.seq
# -bsequence dna-align/RBAM_033300___ywrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05510___ywrA-RBAM_033300___ywrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05510___ywrA-RBAM_033300___ywrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05510___ywrA
# 2: RBAM_033300___ywrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 538
# Identity: 490/538 (91.1%)
# Similarity: 490/538 (91.1%)
# Gaps: 2/538 ( 0.4%)
# Score: 2246.0
#
#
#=======================================
BSNT_05510___ 1 ATGAT-ATCGATCTATTTATTTATGGCGTTTTTTATCGCAAACCTACTGG 49
||||| || |||.|||.|||||||||||||||||.||||||||..|||.|
RBAM_033300__ 1 ATGATCAT-GATTTATGTATTTATGGCGTTTTTTGTCGCAAACGCACTCG 49
BSNT_05510___ 50 GATATGGCGGCGGACCTGCGTCTATCCCGCTAATGTTTGAAGAAGTCGTA 99
|||||||.||||||||.|||||.||||||||.|||||||||||||||||.
RBAM_033300__ 50 GATATGGAGGCGGACCGGCGTCAATCCCGCTGATGTTTGAAGAAGTCGTC 99
BSNT_05510___ 100 AACAGATACAGCTGGCTCTCAAACGATCAATTCTCAAATATGCTCGCACT 149
|||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_033300__ 100 AACAGATACAGCTGGCTCTCAAACGATCAATTCTCAAATATGCTCGCGCT 149
BSNT_05510___ 150 TGCGAACGCATTGCCGGGCCCGATCGCCACGAAAATCGCTGCGTATGTCG 199
|||||||||||||||.||||||||||||||.||||||||.||||||||||
RBAM_033300__ 150 TGCGAACGCATTGCCAGGCCCGATCGCCACCAAAATCGCGGCGTATGTCG 199
BSNT_05510___ 200 GCTACAGCGCAGGCGGGTGGCCCGGCTTCCTAATTGCCCTGATCGCAACC 249
|||||||||||||||||||||||||.|||||.|||||.||||||||.|||
RBAM_033300__ 200 GCTACAGCGCAGGCGGGTGGCCCGGGTTCCTGATTGCGCTGATCGCCACC 249
BSNT_05510___ 250 GTCGTACCGTCGGCGCTCGCATTGATCGTCCTGCTGCGCATCATCCAGCG 299
||||||||||||||||||||||||||||||||..||||||||||.|||||
RBAM_033300__ 250 GTCGTACCGTCGGCGCTCGCATTGATCGTCCTCTTGCGCATCATTCAGCG 299
BSNT_05510___ 300 CTTCCGCCAATCACCTGTCATCAAAGGCATGACGCTGTCCGTCCAGCCTG 349
||||||||||||.||.|||||||||||.||||||||||||||||||||||
RBAM_033300__ 300 CTTCCGCCAATCTCCCGTCATCAAAGGTATGACGCTGTCCGTCCAGCCTG 349
BSNT_05510___ 350 TCATCGCGGTCATGATGCTCATTCTTACCTGGCAAATCAGCGCAGACGGC 399
|||||||.||||||||||||||||||||||||||||||.||||||||.||
RBAM_033300__ 350 TCATCGCCGTCATGATGCTCATTCTTACCTGGCAAATCGGCGCAGACAGC 399
BSNT_05510___ 400 ATCAAAGCGATCGGCTGGATCCAATCGATCGTGATTGCGGGAATTTCGCT 449
||||||||||||||||||.|.|||.||||.|||||||||||.|||||.||
RBAM_033300__ 400 ATCAAAGCGATCGGCTGGGTTCAAGCGATAGTGATTGCGGGGATTTCCCT 449
BSNT_05510___ 450 CCTTGCCATGACAAAATTCAAAATGCATCCGGCATTTTTGATTATCGCGG 499
|||||||.|||||||||||||.|||||||||||.||..||||||||||||
RBAM_033300__ 450 CCTTGCCTTGACAAAATTCAAGATGCATCCGGCCTTCCTGATTATCGCGG 499
BSNT_05510___ 500 CGTTTTTATATGGGGGCCTTGTGATCCCTCATTTTTAG 537
|||||||.|||||.||.||||||.|.||||||||.||.
RBAM_033300__ 500 CGTTTTTGTATGGAGGGCTTGTGGTTCCTCATTTATAA 537
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