Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05509 and RBAM_033290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence dna-align/BSNT_05509___ywrB.1.9828.seq
# -bsequence dna-align/RBAM_033290___ywrB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05509___ywrB-RBAM_033290___ywrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05509___ywrB-RBAM_033290___ywrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05509___ywrB
# 2: RBAM_033290___ywrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity: 530/594 (89.2%)
# Similarity: 530/594 (89.2%)
# Gaps: 3/594 ( 0.5%)
# Score: 2395.0
#
#
#=======================================
BSNT_05509___ 1 ATGAAAAACCATCCTTATCGGGATATGACGGCCGCAATGGTTCGCACCGG 50
|||||| |||||.|||.||||.||.|||||.||.|||||.||.||.||
RBAM_033290__ 1 ATGAAA---CATCCCTATTGGGACATTACGGCGGCGATGGTCCGAACGGG 47
BSNT_05509___ 51 CATATTAGGGTTCGGCGGCGGACCTTCCGTGATTCCGCTGATCCGCCATG 100
|||.||.||.|||||.|||||||||||||||||.|||||.||||||||||
RBAM_033290__ 48 CATTTTCGGATTCGGAGGCGGACCTTCCGTGATCCCGCTCATCCGCCATG 97
BSNT_05509___ 101 AAGCGGTCAATAAATATAAATGGATTGACGATGATGAATTCGGAGAAATA 150
||||.|||||||||||.||||||||.||.|||||||||||||||||||||
RBAM_033290__ 98 AAGCCGTCAATAAATACAAATGGATAGATGATGATGAATTCGGAGAAATA 147
BSNT_05509___ 151 TTAGCAATCGCTAATGCGCTTCCCGGACCGATTGCCACCAAAATGGCTGC 200
|||||.|||||.||||||||||||||||||||||||||.||||||||.||
RBAM_033290__ 148 TTAGCGATCGCAAATGCGCTTCCCGGACCGATTGCCACAAAAATGGCCGC 197
BSNT_05509___ 201 TTATCTGGGCTTTAAGCTAAAAGGCACAATAGGTGCAGTTGTGGCGACCC 250
.|||||||||||||||||.||||||||..||||.|||.|.|||||.||||
RBAM_033290__ 198 GTATCTGGGCTTTAAGCTGAAAGGCACGTTAGGCGCAATCGTGGCAACCC 247
BSNT_05509___ 251 TCGCCCACATTCTGCCTACATGTCTTGCGATGGTGGGCTTGTTTGCGGCT 300
|..||||.||||||||||||||.|||||.||||.||||||||||||||||
RBAM_033290__ 248 TTACCCATATTCTGCCTACATGCCTTGCTATGGCGGGCTTGTTTGCGGCT 297
BSNT_05509___ 301 GTAAATGTGTTAAGCCATTCAGCAATTGTTGCAGGTATGATTGGTGCTGT 350
||.|||||.||||||||.||||||||||||||.||.||||||||.||.||
RBAM_033290__ 298 GTCAATGTCTTAAGCCACTCAGCAATTGTTGCCGGCATGATTGGCGCCGT 347
BSNT_05509___ 351 CACGCCGGTAATTGCGGTCATGCTCGGAATCATGGCGTACGAGTTTGGCC 400
.||.||||||||.||.|||||||||||.||.|||||||||||||||||||
RBAM_033290__ 348 AACACCGGTAATCGCCGTCATGCTCGGCATTATGGCGTACGAGTTTGGCC 397
BSNT_05509___ 401 AAAAAGCGCTTAAAGGTTTCGGCTGGGTCACCGGTATCCTGTTTTTTATC 450
|||||||||||||||||||||||||||||||.||.||.||||||||||||
RBAM_033290__ 398 AAAAAGCGCTTAAAGGTTTCGGCTGGGTCACGGGCATTCTGTTTTTTATC 447
BSNT_05509___ 451 ATCGCTTTTATCGGCCTGCAAACTTTACAGATTAATCCCGGCCTTGTCAT 500
|||||||||||||||||||||||.||||||||.|||||||||.|||||||
RBAM_033290__ 448 ATCGCTTTTATCGGCCTGCAAACGTTACAGATCAATCCCGGCTTTGTCAT 497
BSNT_05509___ 501 TATCATTTTCTTAGCATACGGGGCGTTTCATTTTAAACTGAAAGACAAAA 550
|||.|||||||||||||||||.|||||||||||||||.||||||||||||
RBAM_033290__ 498 TATTATTTTCTTAGCATACGGCGCGTTTCATTTTAAATTGAAAGACAAAA 547
BSNT_05509___ 551 TCACAAATAAACATTCAAAAGATAAAGGAATGTCAGCCTCATGA 594
||||||||||||.|||||||||||||||||||||.|||||||||
RBAM_033290__ 548 TCACAAATAAACGTTCAAAAGATAAAGGAATGTCGGCCTCATGA 591
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