Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05472 and RBAM_033040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:57
# Commandline: needle
# -asequence dna-align/BSNT_05472___ywsC.1.9828.seq
# -bsequence dna-align/RBAM_033040___ywsC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05472___ywsC-RBAM_033040___ywsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05472___ywsC-RBAM_033040___ywsC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05472___ywsC
# 2: RBAM_033040___ywsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1189
# Identity: 972/1189 (81.7%)
# Similarity: 972/1189 (81.7%)
# Gaps: 14/1189 ( 1.2%)
# Score: 3984.0
#
#
#=======================================
BSNT_05472___ 1 ATGTGGTTACTCATTATAGCCTGTGCTGTCATACTGGTCATCGGAAT-AT 49
||||||||||||||||||||||||||||.|.||||..|||||||||| ||
RBAM_033040__ 1 ATGTGGTTACTCATTATAGCCTGTGCTGCCGTACTAATCATCGGAATCAT 50
BSNT_05472___ 50 TAGAAAAACGACGACATCAGAAAAACATTGATGCCCTCCCTGTTCGGGTG 99
| ||||||.|.||.||||||||.||.||.|||||.||.||.||.||.||.
RBAM_033040__ 51 T-GAAAAAAGGCGGCATCAGAAGAATATCGATGCTCTGCCAGTACGCGTC 99
BSNT_05472___ 100 AATATTAACGGCATCCGCGGAAAATCGACTGTGACAAGGCTGACAACCGG 149
||||||||.||.|||||||||||.||.||.||.||.||||||||.|||||
RBAM_033040__ 100 AATATTAATGGTATCCGCGGAAAGTCAACCGTAACGAGGCTGACGACCGG 149
BSNT_05472___ 150 AATATTAATAGAAGCCGGTTACAAGACTGTTGGAAAAACAACAGGAACAG 199
||||.|.||.||.||.||.|||||.||.||.||||||||.||.|||||||
RBAM_033040__ 150 AATACTGATGGAGGCGGGCTACAAAACAGTCGGAAAAACGACGGGAACAG 199
BSNT_05472___ 200 ATGCAAGAATGATTTACTGGGACACACCGGAGGAAAAGCCGATTAAACGG 249
|||||||.|||||.||.|||||.|||||.|||||.||.|||||.||||||
RBAM_033040__ 200 ATGCAAGGATGATCTATTGGGATACACCTGAGGAGAAACCGATCAAACGG 249
BSNT_05472___ 250 AAACCTCAGGGGCCGAATATCGGAGAGCAAAAAGAAGTCATGAGAGAAAC 299
|||||.|||||.|||||||||||.||||||||||||||.||||..|||||
RBAM_033040__ 250 AAACCGCAGGGCCCGAATATCGGCGAGCAAAAAGAAGTAATGAAGGAAAC 299
BSNT_05472___ 300 AGTAGAAAGAGGGGCTAACGCGATTGTCAGTGAATGCATGGCTGTTAACC 349
.||||||.|.||.||.||.||.||||||||||||||.|||||.||.||||
RBAM_033040__ 300 CGTAGAACGGGGCGCCAATGCCATTGTCAGTGAATGTATGGCGGTAAACC 349
BSNT_05472___ 350 CAGATTATCAAATCATCTTTCAGGAAGAACTTCTGCAGGCCAATATCGGC 399
|.||||||||.||.|||||||||||||||||.||.||.|||||.||||||
RBAM_033040__ 350 CGGATTATCAGATTATCTTTCAGGAAGAACTCCTTCAAGCCAACATCGGC 399
BSNT_05472___ 400 GTCATTGTGAATGTTTTAGAAGACCATATGGATGTCATGGGGCCGACGCT 449
|||||.||||||||..|.||||||||||||||.|||||||||||||||||
RBAM_033040__ 400 GTCATCGTGAATGTGCTTGAAGACCATATGGACGTCATGGGGCCGACGCT 449
BSNT_05472___ 450 TGATGAAATTGCAGAAGCGTTTACCGCTACAATTCCTTATAATGGCCATC 499
|||||||||.||.|||||.||||||||.||.||.||.|||||.||.||.|
RBAM_033040__ 450 TGATGAAATCGCTGAAGCATTTACCGCGACGATACCGTATAACGGTCACC 499
BSNT_05472___ 500 TTGTCATTACAGATAGTGAATATACCGAGTTCTTTAAACAAAAAGCAAAA 549
|||||||||||||.||||||||.||.||.|||||||||.|||||||...|
RBAM_033040__ 500 TTGTCATTACAGACAGTGAATACACAGACTTCTTTAAAGAAAAAGCCGCA 549
BSNT_05472___ 550 GAACGAAACACAAAAGTCATCATTGCTGATAACTCAAAAATTACAGATGA 599
||.||.||.||..|.|||||.|||||.||||||||.||||||||||||||
RBAM_033040__ 550 GAGCGGAATACCGAGGTCATTATTGCGGATAACTCTAAAATTACAGATGA 599
BSNT_05472___ 600 GTATTTACGTAAATTTGAATACATGGTATTCCCTGATAACGCTTCTCTGG 649
.||..|.||||||||||||||.|||||.||.||||||||||||||.||.|
RBAM_033040__ 600 ATACCTTCGTAAATTTGAATATATGGTCTTTCCTGATAACGCTTCCCTTG 649
BSNT_05472___ 650 CGCTGGGTGTGGCTCAAGCACTCGGCATTGACGAAGAAACAGCATTTAAG 699
||||.||.||.||.||.||.||.||.||.||.||||||||.||.|||||.
RBAM_033040__ 650 CGCTCGGCGTTGCCCAGGCTCTTGGGATAGATGAAGAAACGGCGTTTAAA 699
BSNT_05472___ 700 GGAATGCTGAATGCGCCGCCAGATCCGGGAGCAATGAGAATTCTTCCGCT 749
||||||||||||||||||||.|||||.||.||.||||||||.||.|||||
RBAM_033040__ 700 GGAATGCTGAATGCGCCGCCTGATCCTGGCGCCATGAGAATCCTGCCGCT 749
BSNT_05472___ 750 GATCAGTCCGAGCGAGCCTGGGCACTTTGTTAATGGGTTTGCCGCAAACG 799
|.||||..|||..|||||.||.||.||.||.||.||.|||||||||||.|
RBAM_033040__ 750 GCTCAGCACGAAGGAGCCCGGTCATTTCGTAAACGGCTTTGCCGCAAATG 799
BSNT_05472___ 800 ACGCTTCTTCTACTTTGAATATATGGAAACGTGTAAAAGAAATCGGTTAC 849
|.||.|||||||||||.||||||||||||||||||||.||||||||.|||
RBAM_033040__ 800 ATGCATCTTCTACTTTAAATATATGGAAACGTGTAAAGGAAATCGGCTAC 849
BSNT_05472___ 850 CCGACCGATGATCCGATCATCATCATGAACTGCCGCGCAGACCGTGTCGA 899
|||||.|||||.||||||.|.|||||||||||||||||.||||||||
RBAM_033040__ 850 CCGACAGATGAACCGATCGTTATCATGAACTGCCGCGCCGACCGTGT--- 896
BSNT_05472___ 900 TCGGACACA-----GCAATTCGCAAATGACGTATTGCCTTATATTGAAGC 944
|||||.| .||.||||||||.|||||..|.||.||.|||.||.|
RBAM_033040__ 897 --GGACAGAACGATTCAGTTCGCAAACGACGTGCTTCCGTACATTAAAAC 944
BSNT_05472___ 945 -AAGTGAACTGATCTTAATCGGTGAAACAACAGAACCGATCGTAAAAGCC 993
||| |||||.||..|.|||||.||.||.||.|||||||||||.|.|||.
RBAM_033040__ 945 GAAG-GAACTCATACTCATCGGCGAGACGACTGAACCGATCGTCAGAGCT 993
BSNT_05472___ 994 TATGAAGAAGGCAAAATTCCTGCAGACAAACTGCATGATCTAGAGTATAA 1043
||||||||||||||.||||||||.||.|.|.||||.|||||.||.|||||
RBAM_033040__ 994 TATGAAGAAGGCAAGATTCCTGCCGATACATTGCACGATCTGGAATATAA 1043
BSNT_05472___ 1044 GTCAACAGATGAAATTATGGAATTGTTAAAGAAAAGAATGCACAACCGTG 1093
.||||||||.|||||.|||||..||.|.||.|.|||||||||.|||||||
RBAM_033040__ 1044 ATCAACAGACGAAATCATGGACGTGCTGAAAACAAGAATGCAAAACCGTG 1093
BSNT_05472___ 1094 TCATATATGGCGTCGGCAATATTCATGGTGCCGCAGAGCCTTTAATTGAA 1143
||||||||||||||||||||||.||.|||.|.||.||.||.|||||||||
RBAM_033040__ 1094 TCATATATGGCGTCGGCAATATCCACGGTTCAGCGGAACCATTAATTGAA 1143
BSNT_05472___ 1144 AAAATCCACGAATACAAGGTTAAGCAGCTCGTAAGCTAG 1182
|||||.||.||.||.|||||.||.||||||||.||||||
RBAM_033040__ 1144 AAAATTCAAGAGTATAAGGTGAAACAGCTCGTTAGCTAG 1182
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