Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05470 and RBAM_033020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:57
# Commandline: needle
# -asequence dna-align/BSNT_05470___ywtB.1.9828.seq
# -bsequence dna-align/RBAM_033020___ywtB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05470___ywtB-RBAM_033020___ywtB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05470___ywtB-RBAM_033020___ywtB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05470___ywtB
# 2: RBAM_033020___ywtB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1156
# Identity: 863/1156 (74.7%)
# Similarity: 863/1156 (74.7%)
# Gaps: 20/1156 ( 1.7%)
# Score: 3151.5
#
#
#=======================================
BSNT_05470___ 1 ATGAAAAAAGAACTGAGCTTTCATGAAAAGCTGCTAAAGCTGACAAAACA 50
|||||||||.||.|.||||||||.|||||.|||||.||||||||.|||||
RBAM_033020__ 1 ATGAAAAAACAATTAAGCTTTCAAGAAAAACTGCTGAAGCTGACCAAACA 50
BSNT_05470___ 51 GCAAAAAAAGAAAACCAATAAGCACGTATTTATTGCCATTCCGATCGT-T 99
|||.||||||||.||||||...|||||.|||||.||..|.|||||||| |
RBAM_033020__ 51 GCAGAAAAAGAAGACCAATCTTCACGTTTTTATCGCGCTGCCGATCGTCT 100
BSNT_05470___ 100 TTTGTCCTTATGTTCGCTTTCATGTGGGCGGGAAAAGCGGAAACGCCGAA 149
|||| |||.|||||||..|.|||...|.|.||.||.|||||||||||||.
RBAM_033020__ 101 TTTG-CCTGATGTTCGTCTGCATCCTGACAGGGAAGGCGGAAACGCCGAG 149
BSNT_05470___ 150 GGTCAAAACGTATTCTGACGACGTACTCTCAGCCTCATTTGTAGGCGATA 199
.||.||||...||.|.||.|||.|..|.|||||||||||.||.||.||||
RBAM_033020__ 150 TGTGAAAAGAAATGCCGATGACCTTGTATCAGCCTCATTCGTCGGAGATA 199
BSNT_05470___ 200 TTATGATGGGACGCTATGTTGAAAAAGTAACGGAGCAAAAAGGGGCAGAC 249
||||||||||.||..||||.||.|||||.||..||||.|||||..|.||.
RBAM_033020__ 200 TTATGATGGGCCGGAATGTCGAGAAAGTGACAAAGCATAAAGGCACGGAG 249
BSNT_05470___ 250 AGTATTTTTCAATATGTTGAACCGATCTTTAGAGCCTCGGATTATGTAGC 299
|||.|.||.|..||.|...|.||..||||...|||.||.||.|||||..|
RBAM_033020__ 250 AGTGTCTTCCGTTACGCAAAGCCATTCTTCGAAGCATCCGACTATGTGTC 299
BSNT_05470___ 300 AGGAAACTTTGAAAACCCGGTAACCTATCAAAAGAATTATAAACAAGCAG 349
.||.|||||||||||||||||.||.|||.|||||||.||.|||.||||.|
RBAM_033020__ 300 GGGGAACTTTGAAAACCCGGTTACATATAAAAAGAACTACAAAGAAGCTG 349
BSNT_05470___ 350 ATAAAGAGATTCATCTGCAGACGAATAAGGAATCAGTGAAAGTCTTGAAG 399
|.|||.|.||.||.||.|||.|.||.||.||..|.||.|||||.||||||
RBAM_033020__ 350 AAAAAAATATCCACCTTCAGTCAAACAAAGATGCCGTAAAAGTATTGAAG 399
BSNT_05470___ 400 GATATGAATTTCACGGTTCTCAACAGC-GCAAACAACCACGCAATGGATT 448
||.|||||||||||.|||||| ||.|| ||.||||||||.||.|||||||
RBAM_033020__ 400 GACATGAATTTCACCGTTCTC-ACGGCAGCCAACAACCATGCGATGGATT 448
BSNT_05470___ 449 ACGGCGTTCAGGGCATGAAAGATACGCTTGGAGAATTTGCGAAGCAAAAC 498
|||||..|||.||.|||...||||||.|||.|||.|||.|.||||||||.
RBAM_033020__ 449 ACGGCCCTCAAGGAATGCGGGATACGGTTGAAGAGTTTTCAAAGCAAAAT 498
BSNT_05470___ 499 CTTGATATCGTTGGAGCGGGATACA-GCTTAAGTGATGCGAAAAAGAAAA 547
|||||..|.||.||.|||||...|| |||.||| ||.||..|..||||.|
RBAM_033020__ 499 CTTGAACTTGTCGGCGCGGGCCTCACGCTGAAG-GAAGCCGAGCAGAACA 547
BSNT_05470___ 548 TTTCGTACCAGAAAGTCAACGGGGTAACGATTGCGACGCTTGGCTTTACC 597
||||.||.||..|.||.|||||..|.|..||.||.||.||.||.||.||.
RBAM_033020__ 548 TTTCTTATCAAGATGTAAACGGAATCAAAATCGCAACACTGGGTTTCACT 597
BSNT_05470___ 598 GATGTGTCCGGGAAAGGTTTCGCGGCTAAAAAGAATACGCCGGGCGTGCT 647
|||||.|||||.|||||.||.||.||||||...|||.|||||||.|||||
RBAM_033020__ 598 GATGTTTCCGGAAAAGGCTTTGCAGCTAAACGAAATGCGCCGGGTGTGCT 647
BSNT_05470___ 648 GCCCGCAGATCCTGAAATCTTCATCCCTATGATTTCAGAAGCGAAAAAAC 697
.||.||.|||||.||..|.||.||.||.||||||||..||||.|||||..
RBAM_033020__ 648 TCCGGCCGATCCAGAGCTGTTTATTCCGATGATTTCTAAAGCCAAAAAGA 697
BSNT_05470___ 698 ATGCTGACATTGTTGTTGTGCAGTCACACTGGGGCCAAGAGTATGACAAT 747
|.||.||..||||..||||.||..||||||||||.||.||.||.||.|||
RBAM_033020__ 698 AAGCCGATCTTGTCATTGTTCAAACACACTGGGGACAGGAATACGATAAT 747
BSNT_05470___ 748 GATCCAAACGACCGCCAGCGCCAGCTTGCAAGAGCCATGTCTGATGCGGG 797
|||||.||.|||.|.||||||||..|.||||||||.|||||.|||||.||
RBAM_033020__ 748 GATCCGAATGACAGACAGCGCCAATTGGCAAGAGCAATGTCAGATGCCGG 797
BSNT_05470___ 798 AGCTGACATCATCGTCGGCCATCATCCGCACGTCTTAGAACCGATTGAAG 847
|||.||.||.||||||||.||.|||||||||||..||||||||||.|||.
RBAM_033020__ 798 AGCGGATATTATCGTCGGACACCATCCGCACGTGCTAGAACCGATCGAAA 847
BSNT_05470___ 848 TATATAACGGAACCGTCATTTTCTACAGCCTCGGCAACTTTGTCTTTGAC 897
|.||..||||.|||||.||||||||||||||.||||||||.||.||.|||
RBAM_033020__ 848 TGTACCACGGCACCGTTATTTTCTACAGCCTGGGCAACTTCGTATTCGAC 897
BSNT_05470___ 898 CAAGGCTGGACGAGAACAAGAGACAGTGCACTGGTTCAGTATCACCTGAA 947
||.||.|||||.|||||.|||||||..||.||.|||||.|||||.|||.|
RBAM_033020__ 898 CAGGGGTGGACAAGAACGAGAGACACGGCGCTTGTTCAATATCATCTGCA 947
BSNT_05470___ 948 GAAAAATGGAACAGGCCGCTTTGAAGTGACACCGATCGATATCCATGAAG 997
||||||.||.||.||.|||||||||||.||.|||||..||||.|||||||
RBAM_033020__ 948 GAAAAACGGCACGGGACGCTTTGAAGTCACGCCGATGAATATTCATGAAG 997
BSNT_05470___ 998 CGACACCTGCACCTGTGAAAAAAGACAGCCTTAAACAGAAAACCATTATT 1047
|.|||||||||||.||.|||||||.||||.|.||.||.|||||.||..|.
RBAM_033020__ 998 CAACACCTGCACCGGTTAAAAAAGGCAGCATCAATCATAAAACGATCGTA 1047
BSNT_05470___ 1048 CGCGAACTGACGAAAGACTCTAATTTCGCTTGGAAAGTAGAAGACGGAAA 1097
||.||||||||||||||.||.|||||||.|||||..||..|.||.|||||
RBAM_033020__ 1048 CGTGAACTGACGAAAGAATCGAATTTCGATTGGAGCGTCAAGGATGGAAA 1097
BSNT_05470___ 1098 ACTGACGTTTGATATTGATCATAGTGACAAACTAAAATCTAAATAA---- 1143
|.|.|||||||||.|.|||||.||.||.|...|||| |||.||
RBAM_033020__ 1098 ATTAACGTTTGATGTGGATCACAGCGATATCTTAAA----AAAGAAAGCG 1143
BSNT_05470___ 1143 ------ 1143
RBAM_033020__ 1144 GAGTGA 1149
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