Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05453 and RBAM_032870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:55
# Commandline: needle
# -asequence dna-align/BSNT_05453___tagD.1.9828.seq
# -bsequence dna-align/RBAM_032870___tagD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05453___tagD-RBAM_032870___tagD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05453___tagD-RBAM_032870___tagD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05453___tagD
# 2: RBAM_032870___tagD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 302/404 (74.8%)
# Similarity: 302/404 (74.8%)
# Gaps: 22/404 ( 5.4%)
# Score: 1134.5
#
#
#=======================================
BSNT_05453___ 1 ATGACAATGAAGAAAGTCATCACATACGGAACGTTTGATTTATTACATTG 50
||||||||.|||||.||.|||||.||||||||||||.|.|||||
RBAM_032870__ 1 ------ATGAAGAAGGTCATTACTTACGGTACGTTTGATTTACTGCATTG 44
BSNT_05453___ 51 GGGACATATCAAGTTATTGGAACGGGCAAAACAATTGGGGGACTATTTAG 100
|||.|||||.||..|..|.||.||.|||||.||..|.||.||.||..|.|
RBAM_032870__ 45 GGGTCATATTAAACTGCTTGAGCGCGCAAAGCAGCTTGGAGATTACCTTG 94
BSNT_05453___ 101 TTGTAGCGATTTCGACTGACGAATTCAATCTTCAAAAGCAGAAAAAAGCA 150
||||.||.||.||.||.|||||.|||||.||.|||||.||.|||||.||.
RBAM_032870__ 95 TTGTTGCCATCTCAACAGACGAGTTCAACCTGCAAAAACAAAAAAAGGCC 144
BSNT_05453___ 151 TATCACAGCTATGAGCACCGCAAGCTGATTCTTGAAACGATCCGCTACGT 200
||.|||||||||||.|||.|.|||||||||||.|||||||||||.||.||
RBAM_032870__ 145 TACCACAGCTATGAACACAGAAAGCTGATTCTGGAAACGATCCGTTATGT 194
BSNT_05453___ 201 AGACGAAGTCATCCCGGAAAAAAACTGGGATCAAAAGGTACAAGATGT-- 248
.|||||||||||.||||||||.|.||||||||||||.||||..||.||
RBAM_032870__ 195 CGACGAAGTCATTCCGGAAAACAGCTGGGATCAAAAAGTACGTGACGTAG 244
BSNT_05453___ 249 --GATCAATCATGATATCGATGTATTTGTCATGGGGGATGACTGGGAAGG 296
||||| || |.|||||.||.||.||.|||||.||.||.||||||||
RBAM_032870__ 245 CGGATCA--CA--ACATCGACGTGTTCGTAATGGGAGACGATTGGGAAGG 290
BSNT_05453___ 297 GAAATTCGACTTCCTAAAGGACTACTGCAAGGTTGTTTACCTCCCGAGAA 346
.||||||||.|||||.||.||..|.|||.|.||..|.||||||||.||||
RBAM_032870__ 291 CAAATTCGATTTCCTTAAAGATCAATGCGAAGTCATCTACCTCCCTAGAA 340
BSNT_05453___ 347 CCGAAGGAATTTCCACGACAAAGATCAAAGAGGAAATCGCGAACC----T 392
|||||||.||||||||.|||.||||.|||.|.|||||.| || |
RBAM_032870__ 341 CCGAAGGCATTTCCACCACACAGATTAAAAAAGAAATTG----CCGGGGT 386
BSNT_05453___ 393 TTAA 396
.|||
RBAM_032870__ 387 GTAA 390
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