Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05437 and RBAM_032810
See
Amino acid alignment /
Visit
BSNT_05437 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:54
# Commandline: needle
# -asequence dna-align/BSNT_05437.1.9828.seq
# -bsequence dna-align/RBAM_032810___mnaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05437-RBAM_032810___mnaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05437-RBAM_032810___mnaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05437
# 2: RBAM_032810___mnaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1164
# Identity: 732/1164 (62.9%)
# Similarity: 732/1164 (62.9%)
# Gaps: 201/1164 (17.3%)
# Score: 2531.0
#
#
#=======================================
BSNT_05437 1 ATGAAGAAACTAAAAGTCATGACAGTATTCGGCACGCGCCCTGAAGCCAT 50
.||||.|||||||||||.|||||.||||||||.||..|.||||||||.||
RBAM_032810__ 1 TTGAAAAAACTAAAAGTAATGACCGTATTCGGTACAAGACCTGAAGCAAT 50
BSNT_05437 51 AAAAATGGCGCCGCTCGTA------CTTGAATTAAGAAAATATCCTCAAA 94
.||||||||.||||||||| ||||| ||||||||...|||
RBAM_032810__ 51 TAAAATGGCTCCGCTCGTATTAGAGCTTGA------AAAATATCAGGAAA 94
BSNT_05437 95 TTGAGTCTTATGTGACGGTTACAGCCCAACATAGGCAAATGCTTGACCAG 144
||||.||....|||||.||.||.||.||.||.||.||.|||||.||.||.
RBAM_032810__ 95 TTGATTCGCTGGTGACTGTAACCGCACAGCACAGACAGATGCTGGATCAA 144
BSNT_05437 145 GTACTTGAAGCTTTTGACTTAAAGCCTGATTTTGATTTGAATATCATGAA 194
||.||||||||.||...|.|.|.|||||||||||||||||||||.|||||
RBAM_032810__ 145 GTGCTTGAAGCATTCAGCATTACGCCTGATTTTGATTTGAATATTATGAA 194
BSNT_05437 195 AGAAAGGCAAACGCTGGCTGAAATTACGTCTAATGCGCTTATGAAGCTAG 244
|||..|.||||||||..|.||||||||.|||.||||..|..||||..|.|
RBAM_032810__ 195 AGAGCGTCAAACGCTTTCAGAAATTACATCTCATGCTTTGCTGAAATTGG 244
BSNT_05437 245 ACGAGCTGTTTCAGTCCA-----TCAAACCGGACATTGTGCTTGTTCACG 289
||.|||||| |||| |.|||||.||.||.||..|.||.||||
RBAM_032810__ 245 ACAAGCTGT-----TCCAAGAAGTAAAACCAGATATCGTTTTGGTCCACG 289
BSNT_05437 290 GCGATACGACAACGACATTTGCGGGTAGTCTTGCTGCTTATTATCACCAG 339
|.||||||||.||.||.||.||.||.||.|||||.||.|.|||.||.||.
RBAM_032810__ 290 GGGATACGACGACAACGTTCGCCGGAAGCCTTGCCGCCTTTTACCATCAA 339
BSNT_05437 340 ATTTCCGTCGGCCATGTAGAGGCGGGACTTAGAACCGGGAACAAATACTC 389
||..|..||||||||||.||.||.||.||..|.||....||.||||||||
RBAM_032810__ 340 ATCGCTATCGGCCATGTGGAAGCCGGTCTGCGTACGCATAATAAATACTC 389
BSNT_05437 390 GCCGTTTCCTGAAGAGCTGAACAGGCTGCTGACGGGATCGATTGCCGATT 439
.||.||.||.||.||..|.||..|||.|.|||||||...|||.||.|||.
RBAM_032810__ 390 TCCTTTCCCCGAGGAAATCAATCGGCAGATGACGGGCGTGATGGCTGATG 439
BSNT_05437 440 TTCATTTTGCGCCGACAGAG-CAGGCCGAAAAGAAT----TTACTCCACG 484
|..|||||||||||||| || ||||||||..||||| ||.|| |
RBAM_032810__ 440 TGAATTTTGCGCCGACA-AGCCAGGCCGAGCAGAATCTGCTTTCT----G 484
BSNT_05437 485 AAAATAAAGATCCGGAGACGATTTTCGTCACCGGAAATACCGCAATTGAT 534
||||||||.|.|||||..|.||.||.|||||.||||||||.||.||.||.
RBAM_032810__ 485 AAAATAAAAAGCCGGATTCTATATTTGTCACGGGAAATACGGCGATAGAC 534
BSNT_05437 535 GCACTTCGCACAACAGTAAGGGACGGCTATGCACATCCCGTCCTTGAAAA 584
||.||||..||.|||||..||||.|..|||...|||||..|..||||.||
RBAM_032810__ 535 GCGCTTCAAACGACAGTGCGGGAAGATTATTTTCATCCGATTTTTGACAA 584
BSNT_05437 585 AATCGGAAGTGA--CAAGATGATTTTACTTAC--CGCACATCGGCGTGAA 630
..| ||||| || ||.|||||||.|..|.|| |||||| |.||||||
RBAM_032810__ 585 GCT-GGAAG-GAAGCAGGATGATTCTTTTAACAGCGCACA--GACGTGAA 630
BSNT_05437 631 AATTTAGGGAAGCCGATGGAAAACATGTTTAAAGCGATCAGGCGAATCGT 680
||||||||.|.||||||||||.|.||||||||.||..||||..||.||||
RBAM_032810__ 631 AATTTAGGCAGGCCGATGGAACAGATGTTTAAGGCCGTCAGAAGAGTCGT 680
BSNT_05437 681 CGAAGAATTTGACGGCGTACAGGTCGTTTATCCCGTTCATCTCAATCCCG 730
.|||||.|||||.|.||||||.||||||||||||||||||.|.|||||||
RBAM_032810__ 681 TGAAGAGTTTGAGGACGTACAAGTCGTTTATCCCGTTCATTTGAATCCCG 730
BSNT_05437 731 CTGTTCGTGAAGCGGCTGCA-AAG--CACTTCGGTGATTTGGATAAAGTC 777
|.|||||||| |||.||| ||| ||.||.|.|||||.|||.|..||.
RBAM_032810__ 731 CAGTTCGTGA---GGCCGCAGAAGCCCATTTTGCTGATTCGGACAGGGTG 777
BSNT_05437 778 CATCTGTTAGAGCCGCTCGAAGTCATCGATTT-TACAACTTCGCTGCTGA 826
||..|..||||.||.||.||.|||.|.||||| .|.|||||||||||..|
RBAM_032810__ 778 CACTTAATAGAACCTCTGGAGGTCGTGGATTTCCATAACTTCGCTGCGAA 827
BSNT_05437 827 AGCTCACTTCATCCTCACCGACTCGGGTGGGGTGCAGGAAGAAGCGCCGT 876
|||..|||||||..|.||||||||.||.|||||.|||||.||||||||.|
RBAM_032810__ 828 AGCAAACTTCATTTTGACCGACTCAGGCGGGGTTCAGGAGGAAGCGCCTT 877
BSNT_05437 877 CGCTTGGAAAGCCGGTCCTCGTGCTTCGCGATACTACGGAACGGCCAGAA 926
|.||.||||||||||||.|.||||||.|.||.||.||.||.||.||.|||
RBAM_032810__ 878 CTCTCGGAAAGCCGGTCTTGGTGCTTAGGGACACAACCGAGCGCCCCGAA 927
BSNT_05437 927 GGCGTTCGGGCCGGTACGCTTAAA-CTGGCAGGAACGGATGAAGATAAGA 975
||.||....|||||.|| .||||| |||||.||.||.||||||||.|.|.
RBAM_032810__ 928 GGAGTGAAAGCCGGGAC-ATTAAAGCTGGCGGGTACAGATGAAGAAACGG 976
BSNT_05437 976 TCTATCAACTGA-------------------------------------- 987
|.|||||.||||
RBAM_032810__ 977 TGTATCAGCTGACAAAACAGCTCTTAACCGATCAGGCTGAATATGAACGG 1026
BSNT_05437 987 -------------------------------------------------- 987
RBAM_032810__ 1027 ATGTCAAAGGCGTCAAACCCTTATGGTGACGGATCGGCTTCAAAACGGAT 1076
BSNT_05437 987 -------------------------------------------------- 987
RBAM_032810__ 1077 TGTGGAAGAACTGCTTTATCGGTACGGCTATAGAAAAACCCGTCCGCAGC 1126
BSNT_05437 987 -------------- 987
RBAM_032810__ 1127 CTTTTACAGAATAA 1140
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.