Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05409 and RBAM_032690
See
Amino acid alignment /
Visit
BSNT_05409 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:53
# Commandline: needle
# -asequence dna-align/BSNT_05409___tuaH.1.9828.seq
# -bsequence dna-align/RBAM_032690___tuaH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05409___tuaH-RBAM_032690___tuaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05409___tuaH-RBAM_032690___tuaH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05409___tuaH
# 2: RBAM_032690___tuaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1277
# Identity: 843/1277 (66.0%)
# Similarity: 843/1277 (66.0%)
# Gaps: 163/1277 (12.8%)
# Score: 2658.0
#
#
#=======================================
BSNT_05409___ 1 ------GTGGAAACAAAAGAAGCAATCATTCATGTCATCGTTGCCACTGC 44
||| |||.|.||.|||||.||.|||||.|...|.||
RBAM_032690__ 1 ATGAAGGTG---------GAACCGATTATTCACGTAATCGTCGGAGCGGC 41
BSNT_05409___ 45 TGAATGGGGAAAAGACCAATTGAGATACAGAAGGCACCGGCTGGCAGAAT 94
.||||||||..|.||||...|||||||||||.|||||||||||||.||||
RBAM_032690__ 42 GGAATGGGGGCATGACCGGCTGAGATACAGACGGCACCGGCTGGCTGAAT 91
BSNT_05409___ 95 TTTTAGCTGCTCAGG----AGGAAACGAAGGAA--GTTATTTGGGTATGT 138
||.|.|| |.|| |.|||||||| || ||.|||||||||||.
RBAM_032690__ 92 TTCTCGC----CCGGCAAAAAGAAACGAA--AAGCGTCATTTGGGTATGC 135
BSNT_05409___ 139 CCGGCTCCGCGTGCCCA--AGGGAAAGAGTTTCAGGA------AGTCCAT 180
|||.|||||||.|||.| |.||..|||....|.||| ||
RBAM_032690__ 136 CCGTCTCCGCGAGCCAATGATGGTCAGATGGCCGGGATCGCCGAG----- 180
BSNT_05409___ 181 TCTGGCATCAGGCAATTCGCTGTCAAAGACCTGCTGCAGAAAAAAATGTT 230
||.|||.||||.|||.||||.||.||.||..|||.|.|||||...||
RBAM_032690__ 181 ---GGAATCCGGCAGTTCACTGTAAAGGATCTCATGCGGCAAAAAGCTTT 227
BSNT_05409___ 231 TCGTTTCGGACGATATACAGATGTCTTTTACAAACATAAGCTCTCCCCAT 280
.||.|||||..|.||||||||..|.|..||||..||||||||.||.||||
RBAM_032690__ 228 CCGCTTCGGCAGGTATACAGACATGTGCTACAGGCATAAGCTTTCACCAT 277
BSNT_05409___ 281 TACTCGATGAGCTTACACCTGCTTCTGCAA-ACGGTGAA------CGCTG 323
| |.||| ||.||||...|.|| |.||.||| |||||
RBAM_032690__ 278 T----GGTGA------ACATGCTGAAGGAAGAAGGAGAAGGGGCCCGCTG 317
BSNT_05409___ 324 CTGTTTATGGTACACGTTTCCCGGATTCCCGCTGCTGTCTTCGCTGTATC 373
|||.|||||||||||.||.|||||.||.|||||.|||.|....||||.||
RBAM_032690__ 318 CTGCTTATGGTACACCTTCCCCGGTTTTCCGCTTCTGGCAGATCTGTTTC 367
BSNT_05409___ 374 CTTGGGATCAGGTCATTTATGACTGCAGTGACTTATGGGCTGCGCCGATC 423
||||||||.|.||.||||||||.||||||||..|.|||||.||.||||||
RBAM_032690__ 368 CTTGGGATGAAGTGATTTATGATTGCAGTGATCTGTGGGCCGCTCCGATC 417
BSNT_05409___ 424 AGCGGCCGATCAAATC----TGCTGTC-------TGAATTCCGGCGAAAA 462
||||||||||| | ||||||| .||| ||||.
RBAM_032690__ 418 AGCGGCCGATC----CGGGGTGCTGTCAAACGTTAGAA-------GAAAT 456
BSNT_05409___ 463 GTCATTAAAACGGCAGAGCTGAGAATTATACAACGAGCAGATTCAATAAC 512
.||||||||..|||.||..|||||||.||.||.||.||.|||||.||.||
RBAM_032690__ 457 ATCATTAAACAGGCGGAATTGAGAATCATTCAGCGTGCCGATTCCATTAC 506
BSNT_05409___ 513 CTGTTCATCAGATTATCTTCACAAGGAAGTAGACAAAAAACT---GACTG 559
.|||.||||.||.|.|||.|||.||||.||.|..|||||.|| ||.|
RBAM_032690__ 507 GTGTACATCTGACTGTCTGCACCAGGAGGTCGGAAAAAAGCTGGAGAAT- 555
BSNT_05409___ 560 CAGGACGAGAAAAGGTTCATACAGTGGAAAACGGTGTGGAGTATGAGCTG 609
|.|.||.|||||..|||| ||..|.||||||||.|||||.|||||.|||
RBAM_032690__ 556 CCGCACCAGAAAGTGTTC--ACCATTGAAAACGGAGTGGAATATGACCTG 603
BSNT_05409___ 610 TTTTC---TGCAAATAAACAAGCTCCCGATCG----CAGTATACTGCAGG 652
||||| .|.||||||||| .||.||| | ||.|.||| ||
RBAM_032690__ 604 TTTTCACGGGAAAATAAACA---GCCGGAT-GAAGACATTTTAC----GG 645
BSNT_05409___ 653 GGAGAGAA-GGAACAGTGTTAGGTTTTATCGGCGGAATTAAACCGAAGCT 701
|||..||| |||||.||..|.|||||||||||||||||.||.||||||||
RBAM_032690__ 646 GGACGGAACGGAACGGTTCTCGGTTTTATCGGCGGAATCAAGCCGAAGCT 695
BSNT_05409___ 702 CGATTTTAAAATGATTGAAGAAGCCGCCCTGCAA------AAGCCTGATT 745
|||||||....|.||.|..|||.|.|| | |.||||||.|
RBAM_032690__ 696 CGATTTTGCGCTTATGGCGGAAACGGC------AGATGTGAGGCCTGACT 739
BSNT_05409___ 746 GGACATTTTTATGGGTTGGCCCGGATGCCACCAATGG----TGACGTTTC 791
||||..||||||.|||.||||||.| ||| || .||||.|.|
RBAM_032690__ 740 GGACGATTTTATTGGTAGGCCCGAA---CAC----GGCTCAGGACGATCC 782
BSNT_05409___ 792 G--TTTCAAG-AGCTGCTGAGGCTTCCCAATGTTATATGGACCGGCCCGG 838
| ||||||| .|||.|||..||.|||.|||||.||.|||||.||.||.|
RBAM_032690__ 783 GGATTTCAAGTCGCTTCTGGAGCGTCCGAATGTCATCTGGACGGGACCTG 832
BSNT_05409___ 839 CGGATCCGAAAGAAGTTCCGCATTTTATGGAGCTTATCGACATTGGCATC 888
|.|..|||||.|||||.|||...|.||||.|||||.|||||||.||||||
RBAM_032690__ 833 CCGCGCCGAATGAAGTGCCGTCCTATATGCAGCTTGTCGACATCGGCATC 882
BSNT_05409___ 889 ATGCCTTATAAACAATCACCGTATAATCAAGCTGTGTTTCCACTGAAACT 938
|||||.||||||.|.|||||.||||||.|.||.||.|||||.||.||.||
RBAM_032690__ 883 ATGCCGTATAAAAATTCACCTTATAATGACGCGGTATTTCCGCTTAAGCT 932
BSNT_05409___ 939 ATTTGAATTTTTAGCGGCAGGAAAACCTGTCGTCGGCTCTAATCTTCCGT 988
.||||||||||||||.||.||.|||||.||.|||||||..||.|||.|.|
RBAM_032690__ 933 TTTTGAATTTTTAGCCGCCGGCAAACCGGTTGTCGGCTGCAACCTTTCTT 982
BSNT_05409___ 989 CAACCTCAAAAATGCAAAA-GCCGTATGTATACGAATATGTAGAAG---G 1034
|.||.|||||||| ||||| |||.|..||.||.|||||.||.|||| |
RBAM_032690__ 983 CTACGTCAAAAAT-CAAAAGGCCTTTCGTCTATGAATACGTTGAAGGCAG 1031
BSNT_05409___ 1035 TGATCATCCAATTGATTTTATAGCAGCTTGTGAAAAAGTTCT-----CGA 1079
|||.|...|| |||||.||.||.||.||.||.....|||| ||.
RBAM_032690__ 1032 TGACCCCGCA---GATTTCATTGCGGCCTGCGACGCGCTTCTGGCAGCGG 1078
BSNT_05409___ 1080 ACAAAACGGAGACGAAACCTATAAAGAAATGCGCCGAAACATCGCTCGCA 1129
|| ||.|| ||.|.|.||..|.|...|||||||..|..|.||.||.|
RBAM_032690__ 1079 AC----CGCAG-CGGATCATACGAGGCTTTGCGCCGTGAATTGGCCCGGA 1123
BSNT_05409___ 1130 CACAAGATTGGAATTGCTTATTTAGACAAATTATGAAATATACAGGG--- 1176
.||..|||||||||...|||||..|.|.|||..|..|||..|| |||
RBAM_032690__ 1124 GACGGGATTGGAATGTTTTATTCGGCCGAATGCTCGAATGCAC-GGGTAT 1172
BSNT_05409___ 1177 ATTCAAAAACATGCGTAG--------- 1194
|||.|||| |||||.|.
RBAM_032690__ 1173 ATTGAAAA--ATGCGCAATCCCATTAA 1197
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.