Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05382 and RBAM_032530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:51
# Commandline: needle
# -asequence dna-align/BSNT_05382___fliW.1.9828.seq
# -bsequence dna-align/RBAM_032530___yviF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05382___fliW-RBAM_032530___yviF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05382___fliW-RBAM_032530___yviF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05382___fliW
# 2: RBAM_032530___yviF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity: 306/436 (70.2%)
# Similarity: 306/436 (70.2%)
# Gaps: 8/436 ( 1.8%)
# Score: 981.0
#
#
#=======================================
BSNT_05382___ 1 ATGATCATTCATACGAAGTACCATGGCCAAATGAACATAAAAGAAGAACA 50
|||||.|||.|.||.||.||.||.||..||||.|..|||.|.||||..||
RBAM_032530__ 1 ATGATAATTAAAACAAAATATCACGGAGAAATCAGAATAGACGAAGGGCA 50
BSNT_05382___ 51 AATCATTCT-TTTTGAAAGCGGGATTCCAGGCTTTTTAGAAGAAAAACAG 99
.||.| ||| .|||||||.|||..|.||.||.|||...||.||.|..||.
RBAM_032530__ 51 GATTA-TCTCATTTGAAAACGGCCTGCCGGGATTTAATGACGAGACTCAA 99
BSNT_05382___ 100 TTCGTCATACTTCCGCTTTCAGAAGACTCTCCATTCGTGGCACTGCAGTC 149
||.||..|.|||||..|.||.|||||.||.||.||..||||.||||||||
RBAM_032530__ 100 TTTGTTGTTCTTCCTTTGTCGGAAGATTCACCGTTTTTGGCGCTGCAGTC 149
BSNT_05382___ 150 CGTC--ACTTCAGAAAATCTTGCGTTTATCGTCGTAAGTCCGTTTATCTT 197
.||| ||...||.|.||| ||.|||||.||||..|||||||||||.||
RBAM_032530__ 150 TGTCAAACAGGAGCACATC--GCCTTTATTGTCGCCAGTCCGTTTATTTT 197
BSNT_05382___ 198 TTTTAAGAATTATGAATTTGATCTTGATGAATCAACTGC-TGAACTTTTG 246
.|||||....||.||||||||..||||..|..|.|| || ||||||||||
RBAM_032530__ 198 CTTTAAAGGGTACGAATTTGACATTGACCATGCGAC-GCTTGAACTTTTG 246
BSNT_05382___ 247 GATATCGATAATATTCAAGACGTAGAAGTCATGACAATATTGACTATGGC 296
.||||.||..||||..|.|||||.|||||.|||.|.||.||.||..|||.
RBAM_032530__ 247 CATATTGAAGATATAGAGGACGTCGAAGTGATGGCGATTTTAACGCTGGA 296
BSNT_05382___ 297 AGAGCCATTTGAAAAGTCTACTGCGAATTTATTGGCTCCCATTATTGTGA 346
||||||.||||||||..|.||.||.||||||...||.||.|||||.||.|
RBAM_032530__ 297 AGAGCCTTTTGAAAACACGACCGCCAATTTAAAAGCGCCGATTATCGTCA 346
BSNT_05382___ 347 ATCGCAAGAACATGATGGCTAAGCAAGTCGTTTTACACGACTCCTCATAT 396
||...|||.|.||||.|||.||.|||.||.|||||||.||..|.||.|||
RBAM_032530__ 347 ATAAAAAGGAAATGAAGGCGAAACAAATCATTTTACATGATGCTTCCTAT 396
BSNT_05382___ 397 ACGACAAAGCATCCGATTGGAGGAGAATCATGCTAG 432
...|||||.||||.|||.|||||||.||||||||||
RBAM_032530__ 397 GAAACAAAACATCTGATAGGAGGAGGATCATGCTAG 432
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