Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05369 and RBAM_032440
See
Amino acid alignment /
Visit
BSNT_05369 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:50
# Commandline: needle
# -asequence dna-align/BSNT_05369.1.9828.seq
# -bsequence dna-align/RBAM_032440___prfB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05369-RBAM_032440___prfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05369-RBAM_032440___prfB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05369
# 2: RBAM_032440___prfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 984
# Identity: 802/984 (81.5%)
# Similarity: 802/984 (81.5%)
# Gaps: 0/984 ( 0.0%)
# Score: 3282.0
#
#
#=======================================
BSNT_05369 1 ATGGCTGATCCGGAATTCTGGAATGATCAGCAAAAAGCTCAAACGGTTAT 50
|||||.||.|||||||||||||||||.|||||.||.||.|||||.||.||
RBAM_032440__ 1 ATGGCGGAACCGGAATTCTGGAATGACCAGCAGAAGGCCCAAACCGTCAT 50
BSNT_05369 51 AAATGAAGCAAACGGTTTAAAGGATTATGTCAATTCGTATAAAAAATTGA 100
.||||||||.||||||.|.||.||.||.||.||.||.|||.|..|..|||
RBAM_032440__ 51 CAATGAAGCGAACGGTCTGAAAGAATACGTGAACTCCTATCATCAGCTGA 100
BSNT_05369 101 ATGAATCCCACGAAGAATTACAAATGACTCATGATCTTTTGAAAGAAGAG 150
..||.||.||||||||..|.||||||||.|||||||||||.||||||||.
RBAM_032440__ 101 GCGAGTCTCACGAAGAGCTGCAAATGACACATGATCTTTTAAAAGAAGAA 150
BSNT_05369 151 CCGGACACTGATCTCCAGCTTGAGCTTGAAAAAGAACTAAAATCATTAAC 200
||.|||...||.||.||||..||||||||||||||.||.||.||||||||
RBAM_032440__ 151 CCTGACCAGGACCTTCAGCAAGAGCTTGAAAAAGAGCTGAAGTCATTAAC 200
BSNT_05369 201 AAAAGACTTCAATGAGTTTGAGCTTCAGCTTCTTCTCAGCGAGCCGTATG 250
.||.||.||.|||||.||||||||||||||.||.|||||.||.||.||||
RBAM_032440__ 201 GAAGGAATTGAATGAATTTGAGCTTCAGCTGCTGCTCAGTGAACCATATG 250
BSNT_05369 251 ATAAAAATAACGCGATTTTAGAACTGCACCCTGGTGCTGGCGGTACAGAG 300
|.|||||||||||||||||||||||.||.||.||.||.||||||||.||.
RBAM_032440__ 251 ACAAAAATAACGCGATTTTAGAACTTCATCCGGGGGCCGGCGGTACGGAA 300
BSNT_05369 301 TCACAGGACTGGGGCTCTATGCTTCTTAGAATGTATACAAGATGGGGAGA 350
||.|||||||||||.||.|||||.||.|||||||||||..|.||||..||
RBAM_032440__ 301 TCCCAGGACTGGGGTTCCATGCTGCTCAGAATGTATACCCGCTGGGCGGA 350
BSNT_05369 351 GCGCCGCGGCTTTAAAGTAGAAACACTCGATTACCTTCCAGGTGACGAGG 400
..|.|||||.||.|||||.|||||.||.|||||.||.||.||.||.||.|
RBAM_032440__ 351 AAGACGCGGTTTCAAAGTTGAAACGCTTGATTATCTCCCGGGAGATGAAG 400
BSNT_05369 401 CTGGAATCAAGTCAGTGACATTGCTCATCAAAGGACATAACGCTTACGGG 450
|.|||||.|||||.||.|||.|||||||.|||||.||.||.||.|||||.
RBAM_032440__ 401 CAGGAATTAAGTCTGTCACACTGCTCATTAAAGGCCACAATGCATACGGC 450
BSNT_05369 451 TATCTCAAAGCAGAAAAAGGTGTCCATCGTCTTGTGCGGATCTCACCATT 500
|||.|.|||||.||||||||.||.||.||.||.||||||||.||.|||||
RBAM_032440__ 451 TATTTAAAAGCGGAAAAAGGCGTACACCGCCTCGTGCGGATTTCTCCATT 500
BSNT_05369 501 TGATTCATCAGGCCGCCGCCACACATCTTTCGTTTCATGTGAAGTCATGC 550
||||||||||||||||||||||||.||.|||||.||.|||||||||||||
RBAM_032440__ 501 TGATTCATCAGGCCGCCGCCACACGTCATTCGTGTCTTGTGAAGTCATGC 550
BSNT_05369 551 CTGAATTTAACGATGAAATTGATATTGATATTCGTGCGGAGGATATTAAA 600
|||||||.||.||.|||||.||.||||||||||||.|.||.|||||||||
RBAM_032440__ 551 CTGAATTCAATGAAGAAATCGACATTGATATTCGTACCGAAGATATTAAA 600
BSNT_05369 601 GTTGACACGTACCGTGCAAGCGGCGCGGGCGGACAGCACGTCAATACGAC 650
|||||.||||||||.||.|||||.||.|||||||||||||||||||||||
RBAM_032440__ 601 GTTGATACGTACCGGGCGAGCGGTGCCGGCGGACAGCACGTCAATACGAC 650
BSNT_05369 651 GGATTCAGCCGTTCGGATTACTCACTTGCCGACGAACGTAGTTGTGACAT 700
.|||||||||||||||||.||.|||.|||||||.||.|||||.||.||.|
RBAM_032440__ 651 TGATTCAGCCGTTCGGATCACCCACCTGCCGACAAATGTAGTCGTCACGT 700
BSNT_05369 701 GCCAAACGGAGCGCTCACAAATTAAAAACCGTGAAAGAGCCATGAAAATG 750
||||.|||||.||.||||||||.||||||||.||..|.||.|||||||||
RBAM_032440__ 701 GCCAGACGGAACGTTCACAAATCAAAAACCGAGACCGGGCGATGAAAATG 750
BSNT_05369 751 CTGAAGGCCAAGCTGTATCAGCGCAGAATTGAAGAGCAGCAGGCTGAACT 800
||.||.||.||||||||||||||||||||||||||.||||||||.||.||
RBAM_032440__ 751 CTCAAAGCGAAGCTGTATCAGCGCAGAATTGAAGAACAGCAGGCGGAGCT 800
BSNT_05369 801 GGATGAAATTCGTGGTGAACAAAAAGAAATCGGCTGGGGCAGCCAAATCC 850
.||.|||||.||.||.|||||.||||||||||||||||||||||||||||
RBAM_032440__ 801 TGACGAAATCCGCGGCGAACAGAAAGAAATCGGCTGGGGCAGCCAAATCC 850
BSNT_05369 851 GTTCTTATGTATTCCATCCGTATTCCATGGTAAAAGACCATCGGACCAAT 900
|.||.||.||.|||||||||||.||||||||.|||||.||.||.||||||
RBAM_032440__ 851 GCTCGTACGTCTTCCATCCGTACTCCATGGTGAAAGATCACCGTACCAAT 900
BSNT_05369 901 ACAGAAATGGGGAACGTTCAAGCTGTAATGGATGGTGACATTGATACGTT 950
||.||||||||||||||.||.||.||.|||||.||.||.||.||||..||
RBAM_032440__ 901 ACCGAAATGGGGAACGTGCAGGCGGTTATGGACGGAGATATCGATATCTT 950
BSNT_05369 951 TATTGATGCCTACCTGCGTTCTAAGCTTTCATAA 984
.|||||.|||||..|.||||||||.||.||.|||
RBAM_032440__ 951 CATTGACGCCTATTTACGTTCTAAACTGTCGTAA 984
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.