Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05332 and RBAM_032220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:46
# Commandline: needle
# -asequence dna-align/BSNT_05332___yvoA.1.9828.seq
# -bsequence dna-align/RBAM_032220___yvoA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05332___yvoA-RBAM_032220___yvoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05332___yvoA-RBAM_032220___yvoA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05332___yvoA
# 2: RBAM_032220___yvoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 749
# Identity: 555/749 (74.1%)
# Similarity: 555/749 (74.1%)
# Gaps: 34/749 ( 4.5%)
# Score: 2042.0
#
#
#=======================================
BSNT_05332___ 1 ATGAATATCAATAAACAATCGCCTATTCCGATTTATTATCAGATTATGGA 50
|||.|.||..||||||||||.||.|||||||||||.|.||||||||||||
RBAM_032220__ 1 ATGCAGATTGATAAACAATCTCCGATTCCGATTTACTTTCAGATTATGGA 50
BSNT_05332___ 51 GCAATTAAAAACCCAAATTAAGAACGGAGAGCTGCAGCCGGATATGCCTC 100
.|||||||||||.|||||.||.|||||.||||||.|..|||||..||..|
RBAM_032220__ 51 ACAATTAAAAACACAAATCAAAAACGGCGAGCTGAAAGCGGATGCGCTGC 100
BSNT_05332___ 101 TTCCTTCCGAGCGCGAATATGCCGAACAATTCGGGATCAGCCGGATGACA 150
||||.||.|||||.|||||.||||||||||||||.||||||||.|||||.
RBAM_032220__ 101 TTCCGTCGGAGCGGGAATACGCCGAACAATTCGGCATCAGCCGAATGACG 150
BSNT_05332___ 151 GTTCGCCAGGCGCTTTCTAATTTAGTTAATGAAGGCTTGCTCTATCGCCT 200
||.||||||||||||||.|||.|.||.||||||||.||..|.||..|.|.
RBAM_032220__ 151 GTGCGCCAGGCGCTTTCCAATCTGGTGAATGAAGGATTTTTATACAGGCA 200
BSNT_05332___ 201 GAAAGGACGGGGCACCTTTGTCAGCAAGCCAAAAATGGAACAAGCACTTC 250
||||||.|||||.||.||.||||||||.|..||.||||||||..|.||||
RBAM_032220__ 201 GAAAGGCCGGGGAACGTTCGTCAGCAAACTGAAGATGGAACAGCCGCTTC 250
BSNT_05332___ 251 AAGGGCTGACAAGCTTTACCGAGGATATGAAAAGCCGCGGGATGACACCG 300
|||||||||||||||||||.||.|||||||.||||||.||.||||..|||
RBAM_032220__ 251 AAGGGCTGACAAGCTTTACGGAAGATATGAGAAGCCGGGGCATGAAGCCG 300
BSNT_05332___ 301 GGCAGCAGGCTCATTGATTATCAGCTTATTGATTCA----ACTGAGGAGC 346
||.|||||.||....||.||.|||| ||||||| ||.||.||..
RBAM_032220__ 301 GGGAGCAGACTTGCCGAATACCAGC----TGATTCAGGCGACGGAAGAAT 346
BSNT_05332___ 347 TCGCGGCTATATTAGGCTGCGGGCACCCCTCCTCTATC-----------C 385
|..|..||||..|.||.||||| ||||| |
RBAM_032220__ 347 TATCTTCTATCCTGGGATGCGG-----------CTATCCGGCAACGCTTC 385
BSNT_05332___ 386 ATAAAATCACTCGGGTGCGGCTGGCAAATGATATTCCAATGGCGATTGAG 435
|||||||||..||.||.|||||||||||||||||.||.||||||||||||
RBAM_032220__ 386 ATAAAATCATCCGCGTCCGGCTGGCAAATGATATCCCGATGGCGATTGAG 435
BSNT_05332___ 436 TCCTCACATATTCCGTTTGAGCTTGCGGGTGAATTGAACGAATCGCATTT 485
.||||..|.||.||||||||....|||||..||.||.|||..||.|||||
RBAM_032220__ 436 GCCTCGTACATCCCGTTTGACAAGGCGGGAAAACTGGACGCCTCCCATTT 485
BSNT_05332___ 486 TCAGTCGTCGATCTATGATCATATTGAAAGGTACAA-CAGCATACCGATT 534
|||.||.||.||.|||||.|||||||||..|||||| ||| ||.|||||.
RBAM_032220__ 486 TCAATCATCCATGTATGAGCATATTGAAGCGTACAATCAG-ATGCCGATC 534
BSNT_05332___ 535 TCCCGTGCAAAACAGGAGCTTGAGCCAAGCGCTGCCACCACGGAAGAAGC 584
||.||.||||||||.||||||||.||..|.||.||..||..|||||||||
RBAM_032220__ 535 TCACGGGCAAAACAAGAGCTTGAACCGGGAGCCGCTTCCGAGGAAGAAGC 584
BSNT_05332___ 585 -GAACATTCTTGGTATTCAAAAGGGAGCGCCTGTCCTATTAATCAAACGA 633
||.| |.||.|||||.||....||.||.||.|||||.|..|||||.||.
RBAM_032220__ 585 TGAGC-TGCTCGGTATCCAGCCCGGCGCCCCCGTCCTCTATATCAAGCGG 633
BSNT_05332___ 634 ACAACATATCTGCAGAACGGAACTGCTTTTGAGCATGCAAAATCTGTATA 683
||.||.|||||||||.||||.|||||.||||||||.|..|||||.|..||
RBAM_032220__ 634 ACCACTTATCTGCAGGACGGCACTGCCTTTGAGCACGTCAAATCCGCCTA 683
BSNT_05332___ 684 CAGAGGCGACCGTTATACATTTGTCCACTATATGGATCGTCTTTCATAA 732
||||||||||||.||.|||||.||.|||||||||||..|..|...||.|
RBAM_032220__ 684 CAGAGGCGACCGCTACACATTCGTGCACTATATGGACAGGGTGAAATGA 732
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