Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05305 and RBAM_032070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence dna-align/BSNT_05305___hisI.1.9828.seq
# -bsequence dna-align/RBAM_032070___hisI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05305___hisI-RBAM_032070___hisI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05305___hisI-RBAM_032070___hisI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05305___hisI
# 2: RBAM_032070___hisI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 637
# Identity: 492/637 (77.2%)
# Similarity: 492/637 (77.2%)
# Gaps: 23/637 ( 3.6%)
# Score: 1865.5
#
#
#=======================================
BSNT_05305___ 1 ATGAAACAGGCAGATGAACTGCGTTTTAACGAGGACGGATTAATTCCTGC 50
|||||||.|||||||||||||||.|||.||||||.||||.|.|||||.||
RBAM_032070__ 1 ATGAAACGGGCAGATGAACTGCGGTTTGACGAGGCCGGACTGATTCCAGC 50
BSNT_05305___ 51 CATCGTGCAGGATGCGGCAAGCAAAGAAGTGCTGACACTTGCCTATATGA 100
||||||||||||||||||||||||||||||.||||||||.||.|||||||
RBAM_032070__ 51 CATCGTGCAGGATGCGGCAAGCAAAGAAGTACTGACACTGGCTTATATGA 100
BSNT_05305___ 101 ACAAGGAATCATACGAAAAAACGCTGGAAACGAAGGAAACATGGTTTTAC 150
|....|||||.||||||||||||.|.||||||||.|||||.|||||||||
RBAM_032070__ 101 ATCGTGAATCCTACGAAAAAACGATAGAAACGAAAGAAACCTGGTTTTAC 150
BSNT_05305___ 151 AGCCGCTCACGCCAAGCGTTATGGCATAAAGGAGAAACCTCAGGGAACAC 200
|||||.||||||...|.|.|.|||||||||||||..||.||.|||||.||
RBAM_032070__ 151 AGCCGTTCACGCGGGGAGCTGTGGCATAAAGGAGCGACGTCGGGGAATAC 200
BSNT_05305___ 201 GCAAGCGGTCAAAGGTATCCGGTATGACTGCGACGAGGACGC-GTTGCTC 249
.|||..|||.||||..|||||.|||||.|||||..|.||.|| .||| ||
RBAM_032070__ 201 CCAAAAGGTGAAAGCCATCCGCTATGATTGCGATCAAGATGCTCTTG-TC 249
BSNT_05305___ 250 GTACTCGTAGAACCGTCAGGCCCGGCATGCCACACTGGCAGCTACAGCTG 299
||.||.|..||.||.|||||.||.||||||||.|..||.|||||||||||
RBAM_032070__ 250 GTGCTTGCGGAGCCCTCAGGACCCGCATGCCATAAGGGAAGCTACAGCTG 299
BSNT_05305___ 300 TTTTACGAAGGAACAAACAGAAGAACAGGCCGC-GGGCCGATTCGGCATC 348
.|||.|...||||.||.|.||.| ||| ||..||.|||||||||
RBAM_032070__ 300 CTTTTCTCCGGAAAAAGCGGATG-------CGCAGGATCGTTTCGGCATC 342
BSNT_05305___ 349 ATGAACGAACTGGAGCGCGTAATCGCGGAACGCCAAGCGGAGATGCCTGA 398
.|.||.||||||||..||||||||||..||||.||.||||||||||||||
RBAM_032070__ 343 TTAAATGAACTGGAAAGCGTAATCGCCAAACGGCAGGCGGAGATGCCTGA 392
BSNT_05305___ 399 AGGAGCTTACACCACTTACCTTTTCCGTGAAGGCGTCGATAAGATTTTGA 448
.|||||.|||||.||.||.||.||.||.||||||||||||||.||..|.|
RBAM_032070__ 393 GGGAGCCTACACAACGTATCTGTTTCGGGAAGGCGTCGATAAAATCCTCA 442
BSNT_05305___ 449 AAAAAGTCGGTGAAGAAGCATCCGAAGTCATCATCGCCGCGAAAAACCGG 498
||||||||||.||||||||..|.||.||.||.||||||||||||||||||
RBAM_032070__ 443 AAAAAGTCGGCGAAGAAGCCGCAGAGGTTATTATCGCCGCGAAAAACCGG 492
BSNT_05305___ 499 GACCACGAGGAACTCAAATGGGAAGCGGCAGACCTGCTGTATCACCTGCT 548
|||||.||.|||.|.||||||||||||||.||..||||||||||..||||
RBAM_032070__ 493 GACCATGAAGAATTAAAATGGGAAGCGGCGGATTTGCTGTATCATTTGCT 542
BSNT_05305___ 549 TGTCCTGCTCAGAGAACAAGC-CTTGCCGCTGGATGATGTGCTTGACGT- 596
.||.||.||..|.||.||..| ||| ||..||||.||.|||||||||||
RBAM_032070__ 543 CGTTCTTCTGCGTGAGCAGTCGCTT-CCTTTGGACGACGTGCTTGACGTC 591
BSNT_05305___ 597 ATTGAAAAAACGCCATTCTGAGAAAGAA---GAGTAA 630
.||| ..||||||||||| ||.| ||||||
RBAM_032070__ 592 CTTG-CGAAACGCCATTC------AGCATCTGAGTAA 621
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