Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05293 and RBAM_031990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence dna-align/BSNT_05293___yvcJ.1.9828.seq
# -bsequence dna-align/RBAM_031990___yvcJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05293___yvcJ-RBAM_031990___yvcJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05293___yvcJ-RBAM_031990___yvcJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05293___yvcJ
# 2: RBAM_031990___yvcJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 888
# Identity: 737/888 (83.0%)
# Similarity: 737/888 (83.0%)
# Gaps: 0/888 ( 0.0%)
# Score: 3081.0
#
#
#=======================================
BSNT_05293___ 1 ATGAGTGTTAGTGAATCACATGATATTCAGCTTGTCATTATAACCGGAAT 50
||||||.|.|.||||...||||||||||||||.|||||.||.||.|||||
RBAM_031990__ 1 ATGAGTATGAATGAAAACCATGATATTCAGCTCGTCATCATTACGGGAAT 50
BSNT_05293___ 51 GTCGGGAGCGGGGAAAACTGTCGCGATTCAAAGCTTTGAAGATCTCGGCT 100
|||.||||||||||||||.|||||.||||||||||||||.||||||||||
RBAM_031990__ 51 GTCTGGAGCGGGGAAAACCGTCGCCATTCAAAGCTTTGAGGATCTCGGCT 100
BSNT_05293___ 101 ATTTCTGCGTCGATAATCTTCCGCCTTCATTGCTTCCGAAGTTTTTAGAG 150
||||.|||||.||.|||||.||||||||.|||||.|||||.|||||.|||
RBAM_031990__ 101 ATTTTTGCGTTGACAATCTGCCGCCTTCCTTGCTGCCGAAATTTTTGGAG 150
BSNT_05293___ 151 CTGATGAAGGAATCAAATTCGAAAATGAGCAAAGTTGCGCTCGTGATGGA 200
||||||||.|||||||.|||.|||||||||||.||.|||||.||.|||||
RBAM_031990__ 151 CTGATGAAAGAATCAAGTTCAAAAATGAGCAAGGTCGCGCTTGTCATGGA 200
BSNT_05293___ 201 TCTGCGTGGCCGCGAATTTTTTGACCGGCTGATTGAAGCGCTGGATGAAA 250
||||||.||.||.||||||||||||.||||||||||.|||||||||||||
RBAM_031990__ 201 TCTGCGGGGACGTGAATTTTTTGACAGGCTGATTGAGGCGCTGGATGAAA 250
BSNT_05293___ 251 TGGCCGAAAATCCGTGGATCACACCGCGAATTTTATTCCTGGACGCGAAG 300
||||.||||||||.|||||.||||||||.|||.|.||..|.|||||.|||
RBAM_031990__ 251 TGGCGGAAAATCCTTGGATTACACCGCGCATTCTCTTTTTAGACGCTAAG 300
BSNT_05293___ 301 GATTCCATTCTCGTCACAAGATATAAAGAAACGAGACGCTCGCATCCGCT 350
||||||||.||.||.||.|||||.|||||||||||.||.||.||.|||||
RBAM_031990__ 301 GATTCCATCCTTGTGACGAGATACAAAGAAACGAGGCGTTCTCACCCGCT 350
BSNT_05293___ 351 GGCAGCGACTGGCCTGCCGCTTGAAGGCATCGCGCTGGAACGAGAGCTGC 400
|||.||.||.||.||.||.||.|||||.||||||||||||||..||||||
RBAM_031990__ 351 GGCCGCTACCGGGCTTCCTCTCGAAGGAATCGCGCTGGAACGCCAGCTGC 400
BSNT_05293___ 401 TTGAGGAATTAAAAGGCCGCTCTCAAATCATTTACGATACGTCTGACATG 450
||||.|||||.|||||.||||||||..|.||.||.||.||.||.||.|||
RBAM_031990__ 401 TTGAAGAATTGAAAGGGCGCTCTCAGCTGATCTATGACACATCGGATATG 450
BSNT_05293___ 451 AAGCCGCGTGATTTGCGTGAAAAAATCGTGAAGCACTTTGCGACAAACCA 500
||.|||||||||.|||||||||||||||||..|||.||.||.||.|||||
RBAM_031990__ 451 AAACCGCGTGATCTGCGTGAAAAAATCGTGGCGCATTTCGCCACGAACCA 500
BSNT_05293___ 501 AGGAGAGACATTTACCGTAAATGTGATGTCATTTGGTTTTAAATACGGTA 550
|||.||.||||||||.||.||.||.||||||||.|||||.||||||||..
RBAM_031990__ 501 AGGTGAAACATTTACAGTGAACGTAATGTCATTCGGTTTCAAATACGGGC 550
BSNT_05293___ 551 TTCCAATTGATGCAGATCTCGTCTTTGATGTCAGATTTTTGCCGAATCCG 600
||||.||.|||||.||.|||||.||||||||.||.|||.|||||||||||
RBAM_031990__ 551 TTCCGATAGATGCCGACCTCGTGTTTGATGTAAGGTTTCTGCCGAATCCG 600
BSNT_05293___ 601 TACTATATCGAAAGCATGCGGCCGCTGACTGGCAAGGATAAAGAGGTTTC 650
|.|||.||.|||||||||.|||||||.||.||.||.|||.|.||.||.||
RBAM_031990__ 601 TTCTACATTGAAAGCATGAGGCCGCTTACGGGGAAAGATGAGGAAGTGTC 650
BSNT_05293___ 651 CTCTTACGTCATGAAGTGGAATGAAACACAAAAGTTCAATGAGAAATTAA 700
.||.||.||.|||||||||||.||||||||||||||.|.|||.||..|..
RBAM_031990__ 651 ATCCTATGTGATGAAGTGGAACGAAACACAAAAGTTTATTGAAAAGCTTG 700
BSNT_05293___ 701 TTGATCTGCTGAGCTTTATGCTTCCATCTTATAAAAGAGAAGGAAAAAGC 750
||||||||||..|||||||||||||.||||||||..|.|||||.||||||
RBAM_031990__ 701 TTGATCTGCTCGGCTTTATGCTTCCGTCTTATAAGCGGGAAGGTAAAAGC 750
BSNT_05293___ 751 CAGGTTGTCATTGCGATCGGCTGCACAGGGGGCCAGCACCGCTCTGTGAC 800
|||.|||||||.|||||||||||.||.||.||||||||||||||.||.||
RBAM_031990__ 751 CAGCTTGTCATCGCGATCGGCTGTACGGGCGGCCAGCACCGCTCCGTCAC 800
BSNT_05293___ 801 ATTAGCCGAGAATTTAGCTGATTATTTCAAAAAGGATTACTATACTCATG 850
..|.||.|||.||||.|||||.|||||.|||||.||||.|||||||||||
RBAM_031990__ 801 GCTCGCTGAGTATTTGGCTGACTATTTTAAAAAAGATTTCTATACTCATG 850
BSNT_05293___ 851 TTACTCACCGGGACATTGAAAAGAGAAGCCGGAAATAA 888
|.||||||||||||||||||||||||||||||||||.|
RBAM_031990__ 851 TCACTCACCGGGACATTGAAAAGAGAAGCCGGAAATGA 888
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