Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05290 and RBAM_031960

See Amino acid alignment / Visit BSNT_05290 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:43
# Commandline: needle
#    -asequence dna-align/BSNT_05290___crh.1.9828.seq
#    -bsequence dna-align/RBAM_031960___crh.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05290___crh-RBAM_031960___crh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05290___crh-RBAM_031960___crh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05290___crh
# 2: RBAM_031960___crh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     203/258 (78.7%)
# Similarity:   203/258 (78.7%)
# Gaps:           0/258 ( 0.0%)
# Score: 795.0
# 
#
#=======================================

BSNT_05290___      1 ATGGTTCAACAGAAAGTGGAAGTTCGATTAAAGACAGGACTGCAAGCACG     50
                     ||||||||..|||||||||||||.||.||||||||.||..||||.||.||
RBAM_031960__      1 ATGGTTCAGGAGAAAGTGGAAGTGCGTTTAAAGACGGGTTTGCAGGCGCG     50

BSNT_05290___     51 TCCTGCTGCTTTGTTTGTACAAGAAGCAAACCGGTTTACGTCAGATGTGT    100
                     |||.|||||.|||||||||||.||.|||||.||.|||.|.||||||||||
RBAM_031960__     51 TCCCGCTGCATTGTTTGTACAGGAGGCAAATCGTTTTGCATCAGATGTGT    100

BSNT_05290___    101 TTCTTGAGAAGGATGGGAAAAAAGTAAACGCCAAAAGCATCATGGGGCTG    150
                     ||||||||||..|.||.||.|||||.||.|||||||||||.|||||..|.
RBAM_031960__    101 TTCTTGAGAAAAACGGAAAGAAAGTGAATGCCAAAAGCATTATGGGATTA    150

BSNT_05290___    151 ATGAGCCTGGCGGTAAGCACAGGCACTGAGGTTACCTTGATTGCCCAGGG    200
                     |||||.||||||||.|||||.||.||.||.||.||..||||.||..|.||
RBAM_031960__    151 ATGAGTCTGGCGGTCAGCACGGGGACGGAAGTCACTCTGATCGCTGAAGG    200

BSNT_05290___    201 AGAAGATGAACAAGAGGCGCTGGAGAAGCTGGCAGCTTACGTTCAAGAAG    250
                     .||.||||||.|.||.||||||||.|||.||.|.|||||.||.||.||||
RBAM_031960__    201 CGACGATGAAAAGGAAGCGCTGGAAAAGTTGTCCGCTTATGTGCAGGAAG    250

BSNT_05290___    251 AAGTTTAG    258
                     ||||.||.
RBAM_031960__    251 AAGTGTAA    258


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