Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05278 and RBAM_031900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:42
# Commandline: needle
# -asequence dna-align/BSNT_05278.1.9828.seq
# -bsequence dna-align/RBAM_031900___yvdC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05278-RBAM_031900___yvdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05278-RBAM_031900___yvdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05278
# 2: RBAM_031900___yvdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity: 159/321 (49.5%)
# Similarity: 159/321 (49.5%)
# Gaps: 111/321 (34.6%)
# Score: 591.0
#
#
#=======================================
BSNT_05278 0 -------------------------------------------------- 0
RBAM_031900__ 1 ATGCAGATGGCTAAAGCAGAACAATGGACGAAAGATTTTTATGAAAAACG 50
BSNT_05278 0 -------------------------------------------------- 0
RBAM_031900__ 51 AGGATGGACGGCGTACGGGCCATTTATCAGAATCGGTTTTTTAATGGAAG 100
BSNT_05278 1 -----------TTGGCCCGGGCTGTCAGGGCGTATGAAATCGGCAGAGAC 39
.|.|||||.||.||.||.||.||||||||||||||||||
RBAM_031900__ 101 AGGCGGGTGAGCTCGCCCGAGCGGTAAGAGCATATGAAATCGGCAGAGAC 150
BSNT_05278 40 CGGCCGGATGAGAAAGAATCGTCACGCGCTGAGCAAAAACAAGAATTGAT 89
|||||||||||.|||||..||.|.|..|||||.|..|..||.||..||||
RBAM_031900__ 151 CGGCCGGATGAAAAAGACGCGACCCAGGCTGAACGCAGGCAGGAGCTGAT 200
BSNT_05278 90 TGAAGAAATGGGAGATGTCATCGGAAATATCGCCATTCTTGCTGATATGT 139
||||||||||||.||.|||.||||||||.|.||.||.|||||.||||.||
RBAM_031900__ 201 TGAAGAAATGGGTGACGTCCTCGGAAATCTGGCTATCCTTGCCGATAAGT 250
BSNT_05278 140 ATGGTGTCTCTTTAGAAGACGTCATGAAGGCCCACCAAGAAAAACTGACA 189
|.||..||.|.||||||||.|..|||||.|||||.||.||||||||||..
RBAM_031900__ 251 ACGGCATCACGTTAGAAGATGCGATGAAAGCCCATCAGGAAAAACTGATC 300
BSNT_05278 190 AAACGATTTGAGCATGCATAA 210
||.||.|||||....|.||||
RBAM_031900__ 301 AAGCGCTTTGAAACCGAATAA 321
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