Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05185 and RBAM_031610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:40
# Commandline: needle
# -asequence dna-align/BSNT_05185___yveQ.1.9828.seq
# -bsequence dna-align/RBAM_031610___epsG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05185___yveQ-RBAM_031610___epsG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05185___yveQ-RBAM_031610___epsG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05185___yveQ
# 2: RBAM_031610___epsG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1113
# Identity: 883/1113 (79.3%)
# Similarity: 883/1113 (79.3%)
# Gaps: 18/1113 ( 1.6%)
# Score: 3482.0
#
#
#=======================================
BSNT_05185___ 1 ATGATTGTATATGCCGTTAATATGGGGATTGTATTTATTTGGTCTTGGTT 50
|||||||||||||..||.||||||||.|||||.|.|||||||||.|||||
RBAM_031610__ 1 ATGATTGTATATGTAGTCAATATGGGAATTGTTTATATTTGGTCATGGTT 50
BSNT_05185___ 51 CGCTAAAATGTGCGGCGGCCGTGACGATTCGCTTGCCACGGGGTATCGGC 100
|||.||||||||||||||.|||||..|.||||||.|.||.||.||.||||
RBAM_031610__ 51 CGCGAAAATGTGCGGCGGGCGTGATCAATCGCTTTCGACCGGATACCGGC 100
BSNT_05185___ 101 CGAATAAGC---TTTTGATCTGGATTCCGCTCGCT-TCACTTGTGCTCGT 146
|||||.||| |..||||| .||||||| ||| ||.||.||..|.||
RBAM_031610__ 101 CGAATCAGCTCGTCATGATC---GTTCCGCT-GCTATCGCTCGTATTGGT 146
BSNT_05185___ 147 GTCAGGTCTCCGCTATCGAGTCGGCACGGATTTTCAGACGTACACGCTGC 196
.||.|||.|.|||||..|||||||.||||||||||||||||||.|||||.
RBAM_031610__ 147 CTCCGGTTTGCGCTACAGAGTCGGGACGGATTTTCAGACGTACGCGCTGA 196
BSNT_05185___ 197 TGTACGAATTGGCGGGCGATTATCAAAATGTGTGGCAGATATTCGGTTTC 246
|||||.|..|||||||..||||...||...|.|||.||||.|||||.|||
RBAM_031610__ 197 TGTACAAGCTGGCGGGAAATTACGGAAGCATTTGGGAGATCTTCGGGTTC 246
BSNT_05185___ 247 GGCACAGCGAAAA---CAGCGACAGATCCGGGGTTTACCGCATTCCTTTG 293
|| |||||||| ||||....||||||||||||||.||..||.|.||
RBAM_031610__ 247 GG---AGCGAAAAAAGCAGCCGTTGATCCGGGGTTTACGGCTCTCATCTG 293
BSNT_05185___ 294 GCTGATGAATTTCATCACGGAAGATCCTCAAATCATGTATTTTACGGTGG 343
|||.||||||||.||||||.|||||||.||||||||||||||.||.||||
RBAM_031610__ 294 GCTCATGAATTTTATCACGAAAGATCCGCAAATCATGTATTTCACCGTGG 343
BSNT_05185___ 344 CGGTCGTGACCTACAGCTTTATTATGAAGACACTCGCCGACTATGGCAGG 393
||||||||||.|.||||||||||.|.|||...||||..||.|..|||.|.
RBAM_031610__ 344 CGGTCGTGACGTGCAGCTTTATTTTAAAGGGGCTCGTTGAGTTCGGCCGT 393
BSNT_05185___ 394 CCGTTTGAGCTGAGTGTCTTTTTGTTTTTGGGAACCTTTCATTACTACGC 443
|||||||||||||||||.||||||||||||||.||.|.|||.||.|||||
RBAM_031610__ 394 CCGTTTGAGCTGAGTGTGTTTTTGTTTTTGGGCACGTATCACTATTACGC 443
BSNT_05185___ 444 GTCTTTTAACGGCATCAGGCAATACATGGTGGCAGCTGTTTTGTTTTGGG 493
.||.||||||||.||||||||.||.||||||||.||.|||||||||||||
RBAM_031610__ 444 TTCCTTTAACGGGATCAGGCAGTATATGGTGGCGGCCGTTTTGTTTTGGG 493
BSNT_05185___ 494 CGGTCCGTTATATCATCAGCGGGAACTGGAAGCG--ATATTTCCTGATTG 541
|.|||||.||..|.||||||||.|.||||||||| ||||.|| .||.|
RBAM_031610__ 494 CCGTCCGCTACGTGATCAGCGGAAGCTGGAAGCGTTATATGTC--AATCG 541
BSNT_05185___ 542 TGCTGGTCAGCTCGCTCTTTCATTCGTCGGCGCTGATTATGATTCCGGTG 591
|||||.|..|.|||||.||||||||.||.||||||||||||||||||||.
RBAM_031610__ 542 TGCTGCTGTGTTCGCTTTTTCATTCCTCAGCGCTGATTATGATTCCGGTT 591
BSNT_05185___ 592 TACTTTATTGTCAGAAGAAAAGCCTGGTCTCCGGCGATATTCGGCCTATC 641
||.|||.|.|||||||.||.|||||||||.||.|||||.|||||.||.||
RBAM_031610__ 592 TATTTTCTCGTCAGAAAAAGAGCCTGGTCGCCCGCGATTTTCGGACTGTC 641
BSNT_05185___ 642 CGCTTTGTTTCTCGGCATGACATTTTTATATCAAAAATTTATTTCTGTGT 691
.||.||||||||....|||||.|||.|.|||||.||.||.|||||..|||
RBAM_031610__ 642 GGCATTGTTTCTTCTTATGACGTTTCTGTATCAGAAGTTCATTTCGCTGT 691
BSNT_05185___ 692 TTGTCGTTGTACTTGAAAACAGCTCATACAGCCATTATGAAAAATGGCTC 741
|||||||.||.||.|||||||||||||||.||||||||||.||||||||.
RBAM_031610__ 692 TTGTCGTCGTGCTGGAAAACAGCTCATACGGCCATTATGAGAAATGGCTG 741
BSNT_05185___ 742 ATGACGAACACAAATGGAATGAATGTGATCAAAATCGCTGTGTTGGTTCT 791
|||||.||.||.|||||.|||||.||..|.||||||||.|||.||.||||
RBAM_031610__ 742 ATGACCAATACGAATGGGATGAACGTCGTAAAAATCGCGGTGCTGCTTCT 791
BSNT_05185___ 792 GCCGCTGTTCCTTGCATTTTGCTATAAAGAACGACTGCGGAGTCTGTGGC 841
|||||||||..|.||.||.||||||...||.||.|||||||..||.||||
RBAM_031610__ 792 GCCGCTGTTTTTGGCTTTCTGCTATCGGGAGCGGCTGCGGAAGCTCTGGC 841
BSNT_05185___ 842 CGCAAATTGATATTGTCGTCAATTTGTGCCTGCTAGGTTTTTTGTTCGGC 891
|..|.|.||||.|..||||.|||||.||.|||||.||..|..|.|||||.
RBAM_031610__ 842 CTGACAGTGATGTCATCGTGAATTTCTGTCTGCTCGGCCTGCTCTTCGGT 891
BSNT_05185___ 892 CTTTTGGCCACAAAGGACGTGATTTTTGCCAGATTCAATATTTATTTCGG 941
||||||||.||||||||.||.|||||.|||.||||.|||||.||||||||
RBAM_031610__ 892 CTTTTGGCGACAAAGGATGTTATTTTCGCCCGATTTAATATATATTTCGG 941
BSNT_05185___ 942 TCTGTATCAAATGATCCTAGTCCCTTATTTCGTCAGGATATTTGATGAAA 991
.|||||.|||||||||.|..||||||||||.||.||.||.||||||||||
RBAM_031610__ 942 CCTGTACCAAATGATCTTGATCCCTTATTTTGTGAGAATTTTTGATGAAA 991
BSNT_05185___ 992 AATCGAACGCTCTTATCTATATCGCTATCGTTGTTTGTTATTTTCTTTAC 1041
||||.||.||.||.||.||||||||.||..||||.|||||||||||||||
RBAM_031610__ 992 AATCAAATGCGCTGATTTATATCGCCATTATTGTCTGTTATTTTCTTTAC 1041
BSNT_05185___ 1042 AGTTATTTGCTTATGCCGGTCGATTCATCGGTTCTGCCTTACAGAACGAT 1091
|||||.||||||||||||||||||||.||.||.||.||.|||||||||||
RBAM_031610__ 1042 AGTTACTTGCTTATGCCGGTCGATTCGTCTGTGCTTCCGTACAGAACGAT 1091
BSNT_05185___ 1092 TTTTTCCCGGTAA 1104
|||||||||||||
RBAM_031610__ 1092 TTTTTCCCGGTAA 1104
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