Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05168 and RBAM_031490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:38
# Commandline: needle
# -asequence dna-align/BSNT_05168.1.9828.seq
# -bsequence dna-align/RBAM_031490___yvfI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05168-RBAM_031490___yvfI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05168-RBAM_031490___yvfI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05168
# 2: RBAM_031490___yvfI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 738
# Identity: 551/738 (74.7%)
# Similarity: 551/738 (74.7%)
# Gaps: 33/738 ( 4.5%)
# Score: 1951.5
#
#
#=======================================
BSNT_05168 1 TTGAAATACAAACAGATTAAAACAAAAAAAATATATGAAGAAGTAGCGGA 50
||||||||.|||||.||||||||.||||||||.||.||.|||||.||.||
RBAM_031490__ 1 TTGAAATATAAACAAATTAAAACGAAAAAAATCTACGAGGAAGTCGCTGA 50
BSNT_05168 51 TGCACTATTAGATATGATCAAAAAC-GGCGAATTGAAGCCTGGGGATAAA 99
.|||.|..|.||.|.||| ||||.| |||||..|.|||||.|||||.||.
RBAM_031490__ 51 CGCATTGCTGGAGAAGAT-AAAAGCGGGCGAGCTTAAGCCGGGGGAAAAG 99
BSNT_05168 100 CTGGACTCTGTTCAGGCGCTTGCTGAGAGCTTTCAAGTCAGCCGTTCAGC 149
||.||.||.||||||||||||.|||||||.|||||.||||||||.||.||
RBAM_031490__ 100 CTTGATTCCGTTCAGGCGCTTTCTGAGAGTTTTCAGGTCAGCCGCTCGGC 149
BSNT_05168 150 GGTTCGCGAAGCACTTTCTGCGCTAAAGGCGATGGGGCTTGTCGAAATGA 199
|||..|.|||||.||.||.||..|.||.|||||||||||.|||||.||||
RBAM_031490__ 150 GGTCAGAGAAGCGCTGTCGGCTTTGAAAGCGATGGGGCTCGTCGACATGA 199
BSNT_05168 200 AACAGGGAGAAGGCACGTATCTGAAG-GAATTTGAGC--TCAATCAAATT 246
|.||||||||||||||.|| |..||| |||||||||| || |||..||
RBAM_031490__ 200 AGCAGGGAGAAGGCACATA-CATAAGAGAATTTGAGCCGTC--TCATGTT 246
BSNT_05168 247 TCTCAGCCGCTCTCAGCCGCCCTTCTGATGAAAAAAGAGGACGTCAAGCA 296
||.||||||||.||..|||||||..||||||||||||||||||||||.||
RBAM_031490__ 247 TCCCAGCCGCTTTCTTCCGCCCTCTTGATGAAAAAAGAGGACGTCAAACA 296
BSNT_05168 297 GCTGCTCGAGGTCAGAAAACTGCTTGAAATCGGCGTGGCTTCACTAGCGG 346
|||||||||.||||||||.|||||||||.|||||||.||..|..|.||.|
RBAM_031490__ 297 GCTGCTCGAAGTCAGAAAGCTGCTTGAACTCGGCGTCGCCGCCATGGCCG 346
BSNT_05168 347 CTGAAAAAAGGACAGAAGCAGATCT-CAAAAGAATTCATGATGCACTAAA 395
||||||||.|.||.||||..|||.| ||||| |||.|...|.||.||...
RBAM_031490__ 347 CTGAAAAACGCACGGAAGACGATTTACAAAA-AATCCGCCAAGCTCTCCT 395
BSNT_05168 396 GGAAATGGGCAG-CATTGAAGCGGACGGGGAGCTGGGAGAGAAAGCAGAC 444
|||.|| |..|| ||||||.|..||||..||..||||.||.|||||.||.
RBAM_031490__ 396 GGAGAT-GAAAGACATTGACGGAGACGAAGAATTGGGCGAAAAAGCGGAT 444
BSNT_05168 445 TTTGCATTTCATCTTGCGCTTGCGGACGCTTCTCAAAATGAACTTCTTAA 494
||..|.|||||..|.|||||.|||||.||.||.|||||.|..||.||.||
RBAM_031490__ 445 TTCTCCTTTCACATGGCGCTGGCGGAAGCATCACAAAACGGGCTGCTCAA 494
BSNT_05168 495 ACACTTGATGAATCACGTGTCATCATTGCTGCTGGAAACAATGAGGGAAA 544
.||..|.||||||||.||.||..|..|.||..|||||||||||||.||||
RBAM_031490__ 495 GCATCTCATGAATCATGTCTCCGCGCTCCTTTTGGAAACAATGAGAGAAA 544
BSNT_05168 545 CGAGGAAAATCTGGCTGTTTTCCAA--GAA-GACCTCCGTTCAGCGGCTG 591
||||.|||||.|||||||||||.|| ||| || .|||.|||||..||
RBAM_031490__ 545 CGAGAAAAATTTGGCTGTTTTCTAAACGAACGA---GCGTGCAGCGATTG 591
BSNT_05168 592 TATGAGGAGCACGAACGGATTTACAATGCTGTGGCTGCCGGGAA-----C 636
|||||.|||||.|||||.|||||||..||.||.||.||| || |
RBAM_031490__ 592 TATGAAGAGCATGAACGCATTTACAGCGCCGTCGCCGCC---AAAGACGC 638
BSNT_05168 637 GG-TGCACAGGCGGAAGCCGCCATGCTGGCGCATTTGACGAATGTGGAAG 685
|| || |.|||||||||||.|||...|||||..|||||||||||||||
RBAM_031490__ 639 GGATG---AAGCGGAAGCCGCGATGACCGCGCACCTGACGAATGTGGAAG 685
BSNT_05168 686 ATGTGCTTTCGGGATATTTCGAGGAAAATGTGCAATAA 723
|.|||||...||..|||||.||.|||||||| |||.
RBAM_031490__ 686 AAGTGCTGGGGGCTTATTTTGACGAAAATGT---ATAG 720
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