Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05148 and RBAM_031460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:38
# Commandline: needle
# -asequence dna-align/BSNT_05148___yvfW.1.9828.seq
# -bsequence dna-align/RBAM_031460___yvfW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05148___yvfW-RBAM_031460___yvfW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05148___yvfW-RBAM_031460___yvfW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05148___yvfW
# 2: RBAM_031460___yvfW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1446
# Identity: 1159/1446 (80.2%)
# Similarity: 1159/1446 (80.2%)
# Gaps: 27/1446 ( 1.9%)
# Score: 4668.5
#
#
#=======================================
BSNT_05148___ 1 ATGGCGATGAAAATCGGTACTGACGCTTTTAAAGAGCGGGTATCACAGGG 50
||||||||||||||.|.||||||||||||||||||||||.|.||
RBAM_031460__ 1 ------ATGAAAATCGGTACCGCCGCTTTTAAAGAGCGGGTATCAGAAGG 44
BSNT_05148___ 51 GATTGATAATGAATTTATGAGAGGTGCTGTTTCGGGTGCACAGGAGCGTC 100
.||.||||||||.|||||||||||.||.||.||.||.||.|||||.||.|
RBAM_031460__ 45 AATAGATAATGAGTTTATGAGAGGAGCCGTCTCCGGAGCGCAGGAACGGC 94
BSNT_05148___ 101 TGCGGACGCGGCGCCTAGAGGCAGCAGAAGAACTGGGAAACTGGGAGGAG 150
|..||||..|..|.||..||||.||.||||||.||||||||||||||||.
RBAM_031460__ 95 TCAGGACAAGAAGGCTTCAGGCGGCCGAAGAATTGGGAAACTGGGAGGAT 144
BSNT_05148___ 151 TGGCG--CTCATTATCAGAGGAAATCAGGCAGCATGTCCTTGAAAACCTT 198
||||| |.||| .|.||.||||||||.||||||||.||.||.||.|||
RBAM_031460__ 145 TGGCGTTCCCAT--GCCGAAGAAATCAGACAGCATGTGCTGGACAATCTT 192
BSNT_05148___ 199 GATTTCTATCTCGGACAGCTTGCCGAAAATGTGGCGAAAAGAGGCGGACA 248
|||||||||.|.|.||||||.|||||||||||.||.||.|||||||||||
RBAM_031460__ 193 GATTTCTATTTGGAACAGCTCGCCGAAAATGTCGCCAACAGAGGCGGACA 242
BSNT_05148___ 249 TGTCTATTTCGCGGAAACAGCGGAAGAGGCGTCTTCCTATATTCGGGATG 298
.||||.||||||.|||||.||||||||.|||||.||||||||.||.||||
RBAM_031460__ 243 CGTCTTTTTCGCTGAAACGGCGGAAGAAGCGTCCTCCTATATCCGCGATG 292
BSNT_05148___ 299 TCATTCAAAAGAAGAACGGGAAGAAAATTGTGAAATCTAAATCAATGGTC 348
||||.|...||||.||||..||.|||||.||.|||||.|||||.|||||.
RBAM_031460__ 293 TCATCCGGCAGAAAAACGCCAAAAAAATCGTAAAATCCAAATCCATGGTG 342
BSNT_05148___ 349 ACAGAGGAAATCAATCTGAATGAGGTGCTGGAGAAGGAAGGCTGTGAAGT 398
|||||.|||||||||.||||.||.|||||.|||.|.||.|||||||||||
RBAM_031460__ 343 ACAGAAGAAATCAATATGAACGAAGTGCTTGAGGAAGAGGGCTGTGAAGT 392
BSNT_05148___ 399 CGTAGAAACCGATCTCGGCGAGTATATTTTGCAGATTGATGATCACGATC 448
|..||||||.|||||||||||.||.|||.|.||||||||.||||||||||
RBAM_031460__ 393 CACAGAAACGGATCTCGGCGAATACATTCTCCAGATTGACGATCACGATC 442
BSNT_05148___ 449 CGCCGTCACATATCGTAGCGCCCGCCCTTCATAAAAATAAAGAGCAGATA 498
||||||||||||||||.||.|||||.|||||.|||||.|||||||||||.
RBAM_031460__ 443 CGCCGTCACATATCGTTGCTCCCGCTCTTCACAAAAACAAAGAGCAGATC 492
BSNT_05148___ 499 CGCGATGTGTTTAAAGAAAGACTGGACTATCAACATACAGAAAAACCGGA 548
||.||.||.||||||||.|||||.||.||..||||.||.|||||||||||
RBAM_031460__ 493 CGTGACGTATTTAAAGAGAGACTCGAATACAAACAGACGGAAAAACCGGA 542
BSNT_05148___ 549 AGAGCTGGTGATGCATGCGCGCGCCATTCTCCGGAAAAAGTTTCTGGAAG 598
||||||.||.|||||.||||||..|.|||||||||||||.|||||.||||
RBAM_031460__ 543 AGAGCTCGTCATGCACGCGCGCAGCGTTCTCCGGAAAAAATTTCTCGAAG 592
BSNT_05148___ 599 CGGATATCGGCATTACCGGCTGTAACTTCGCCATCGCTGACACGGGTTCC 648
|||||.||||||||||.|||||.|||||.||.|||||.||.||.||.||.
RBAM_031460__ 593 CGGATGTCGGCATTACAGGCTGCAACTTTGCGATCGCGGATACCGGATCG 642
BSNT_05148___ 649 GTCAGCCTTGTGACCAATGAAGGAAATGGACGGCTTGTGAGCACCTTGCC 698
|||||.||.|||||.||.||||||||.||.||.||||||..|.|..||||
RBAM_031460__ 643 GTCAGTCTCGTGACGAACGAAGGAAACGGCCGCCTTGTGTCCGCGCTGCC 692
BSNT_05148___ 699 GAAAACACAAATTACCGTCATGGGAATGGAGCGGATTGTCCCGTCATTTT 748
|||.||.||.||.|||||.|||||||||||||||||.||.||||||||||
RBAM_031460__ 693 GAAGACGCAGATCACCGTGATGGGAATGGAGCGGATCGTTCCGTCATTTT 742
BSNT_05148___ 749 CTGAATTTGAAGTGCTAGTCAGCATGCTGACAAGAAGTGCTGTCGGACAG 798
||||.|||||||||||.||||||||||||||.|||||.||.|||||.|||
RBAM_031460__ 743 CTGAGTTTGAAGTGCTTGTCAGCATGCTGACGAGAAGCGCGGTCGGTCAG 792
BSNT_05148___ 799 CGGCTGACAAGTTATATTACAGCTTTGACGGGTCCGAAGCTGGAAGGTGA 848
|||||.||||||||.|||||.||..|||||||.||...||.|.||||.||
RBAM_031460__ 793 CGGCTTACAAGTTACATTACGGCGCTGACGGGACCCCGGCAGCAAGGAGA 842
BSNT_05148___ 849 AGTGGACGGTCCGGAAGAATTCCATCTTGTCATCGTTGACAATGGACGAT 898
||.||||||.||.||.||||||||.|||||..|.||.|||||.||.||.|
RBAM_031460__ 843 AGCGGACGGGCCTGAGGAATTCCACCTTGTGGTTGTGGACAACGGGCGTT 892
BSNT_05148___ 899 CCAATATCCTTGGAACGGAATTCCAGTCTGTGCTGCAATGTATCCGCTGT 948
||...||.||.||.|||||||||||.||.||||||||||||||||||||.
RBAM_031460__ 893 CCCGCATACTCGGCACGGAATTCCAATCGGTGCTGCAATGTATCCGCTGC 942
BSNT_05148___ 949 GCCGCCTGTATCAATGTCTGTCCTGTGTACCGCCATGTCGGCGGACATTC 998
||||||||.|||||.||||||||.||||||||.||||||||||||||.||
RBAM_031460__ 943 GCCGCCTGCATCAACGTCTGTCCCGTGTACCGGCATGTCGGCGGACACTC 992
BSNT_05148___ 999 ATACGGCTCAATCTACTCGGGGCCTATCGGAGCGGTTTTATCACCGTTGC 1048
.|||||.||.|||||.|||||.||.|||||.||.||.|||||.||..|.|
RBAM_031460__ 993 GTACGGGTCCATCTATTCGGGTCCGATCGGCGCCGTCTTATCGCCTCTTC 1042
BSNT_05148___ 1049 TCGGCGGTTATGACGATTATAAGGAGCTGCCGTACGCGTCTTCACTGTGC 1098
|||||||.||||||||.||.||||||||.||||||||.|||||..|.|||
RBAM_031460__ 1043 TCGGCGGATATGACGAATACAAGGAGCTCCCGTACGCATCTTCCTTATGC 1092
BSNT_05148___ 1099 GCTGCTTGTTCAGAAGCCTGCCCGGTCAAAATCCCGCTTCATGAGCTGCT 1148
||.||.|||.|.|||||.||.||.||.|||||.|||||.||.||||||||
RBAM_031460__ 1093 GCGGCCTGTACGGAAGCATGTCCCGTTAAAATTCCGCTGCACGAGCTGCT 1142
BSNT_05148___ 1149 ACTCAAGCATCGTCAGAATATCGTCGAAAAAGAAGGCAGGGCGCCGATCA 1198
.|||||||||||.|||||.|||||.||||||||.||||..||||||||||
RBAM_031460__ 1143 GCTCAAGCATCGGCAGAACATCGTGGAAAAAGAGGGCAAAGCGCCGATCA 1192
BSNT_05148___ 1199 GTGAAAAGCTTGCAATGAAAGCATTCGGACTTGGCGCATCCTCCTTATCG 1248
|.|||||.||.||.||||||||.|||||.||.|||.|.||.|||...||.
RBAM_031460__ 1193 GCGAAAAACTGGCGATGAAAGCCTTCGGGCTCGGCTCGTCATCCCCGTCC 1242
BSNT_05148___ 1249 CTTTACAAAATGGGCTCAAAATGGGCGCCGGCCGCCATGACGCCTTTTAC 1298
|||||.||||||||.||.|||||||||||.||||||||||||||.|||||
RBAM_031460__ 1243 CTTTATAAAATGGGATCGAAATGGGCGCCTGCCGCCATGACGCCGTTTAC 1292
BSNT_05148___ 1299 AGAGGACGAAAAAATTTCGAAAGGGCCCGGCCCGCTTAAAA-ATTGGAC- 1346
.||.||.||.|||||.||.||||||||.||.||| |||||| |.|||||
RBAM_031460__ 1293 GGAAGATGACAAAATATCAAAAGGGCCGGGGCCG-TTAAAAGAATGGACG 1341
BSNT_05148___ 1347 CCAGATCCGCGACTTTCCGGCACCGCATAAATCGAGATTCAGAGACTGGT 1396
.|| ||.||.|||||.|||||.|||||||||||||||||||||||.||||
RBAM_031460__ 1342 GCA-ATACGGGACTTCCCGGCGCCGCATAAATCGAGATTCAGAGATTGGT 1390
BSNT_05148___ 1397 TTGCGGAC--AGAGAAACAAGTGAACGCACGAAGGAGGAGCAGTGA 1440
||...||| .||.|||||| ||||.|||..|.|||
RBAM_031460__ 1391 TTAAAGACCGGGAAAAACAA-----------AAGGGGGAAGAATGA 1425
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