Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05120 and RBAM_031120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:36
# Commandline: needle
# -asequence dna-align/BSNT_05120___yvbG.1.9828.seq
# -bsequence dna-align/RBAM_031120___yvbG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05120___yvbG-RBAM_031120___yvbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05120___yvbG-RBAM_031120___yvbG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05120___yvbG
# 2: RBAM_031120___yvbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity: 483/657 (73.5%)
# Similarity: 483/657 (73.5%)
# Gaps: 48/657 ( 7.3%)
# Score: 1782.5
#
#
#=======================================
BSNT_05120___ 1 ATGTTCTCATTCATCGTTCACGTTCTCATTTCTTTATTCGCAGTATCGAA 50
|||||.|||||||||.||||.||..|||||||..|.||.|||||.||.||
RBAM_031120__ 1 ATGTTTTCATTCATCATTCATGTCTTCATTTCACTGTTTGCAGTCTCCAA 50
BSNT_05120___ 51 TCCGATCGGAAACGTACCGATATTTCTGACGCTGACAGAAGGCTATACTG 100
|||.|||||||||||.|||||.|||||..|.|||||.||||| .||||
RBAM_031120__ 51 TCCCATCGGAAACGTGCCGATTTTTCTTTCACTGACGGAAGG--GTACT- 97
BSNT_05120___ 101 CAGCG--GAAAGA----AAAGCGATTGCCCGGAAGGC-----AGCTAT-- 137
|| |||||| |.||||||.||.||.||||| .|||.|
RBAM_031120__ 98 ---CGGAGAAAGAACGGACAGCGATCGCGCGCAAGGCTTCCGTGCTGTCG 144
BSNT_05120___ 138 TTTATCCTTTTTTATTCTCGCAGCTTTTTTGTTTTTCGGTCATCTTATCT 187
|||||| ||..|.||.||||||||..|.|||||.|||||.||||
RBAM_031120__ 145 TTTATC-------ATCTTGGCGGCTTTTTTAATCTTCGGCCATCTGATCT 187
BSNT_05120___ 188 TTAAACTGTTTGATATCAACATTCACGCGCTACGAGTGGCGGGCGGCATA 237
|||||||||||||.||.||||||||.||..||||..|.|||||||||||.
RBAM_031120__ 188 TTAAACTGTTTGACATTAACATTCATGCCTTACGTATCGCGGGCGGCATT 237
BSNT_05120___ 238 TTCATTTTCGGCATTGCCTATAATCTATTGAATGCGAAAGAATCCCATGT 287
||.|||||||||||.||.||||||||..||||.|||||..||||.|||||
RBAM_031120__ 238 TTTATTTTCGGCATCGCTTATAATCTTCTGAACGCGAAGAAATCTCATGT 287
BSNT_05120___ 288 GCAATCTCTTCACCATGATGAACATAA---GGAAAGCAAGGAAAAAGCGG 334
.||.||||| ||||.|||||.|.|| |||.||||||||.|||||.|
RBAM_031120__ 288 ACAGTCTCT---CCATCATGAAGAGAAAGGGGAGAGCAAGGAGAAAGCCG 334
BSNT_05120___ 335 ATATATCAGTCACACCTTTATCCATTCCGATCATTGCTGGGCCCGGAACG 384
|||||||.||.||.|||||.||.||||||||.||.||.||.|||||.|||
RBAM_031120__ 335 ATATATCTGTGACGCCTTTGTCGATTCCGATTATCGCCGGACCCGGTACG 384
BSNT_05120___ 385 ATTGCAACAGTGATGAGCCTTTCCGCCGGACATAGCGGCATTGGTCATTA 434
||.||.||.||||||||.||.||.|||||.|||.|||||||....|||||
RBAM_031120__ 385 ATCGCGACGGTGATGAGTCTGTCGGCCGGCCATGGCGGCATCTTCCATTA 434
BSNT_05120___ 435 --------TGCGGCTGTCATGATCGGCATAGCCGCCGTTATTGCCCTGAC 476
||| |.||||||||.||.|||||.||.||..||||
RBAM_031120__ 435 CATCAGCGTGC--------TTATCGGCATTGCGGCCGTCATCGCGATGAC 476
BSNT_05120___ 477 CTTTCTCTTTTTCCACTATTCTGCTTTTATCAGCAGCAAACTCGGAAAAA 526
.||..||||.||.||||||||..||||.|||||||..||.|||||.||||
RBAM_031120__ 477 GTTCATCTTCTTTCACTATTCATCTTTCATCAGCAATAAGCTCGGGAAAA 526
BSNT_05120___ 527 CTGAGATGAATGTGATTACCAGACTGATGGGATTAATCTTAGCCGTGGTT 576
|.||.|||||.||.||||||.||||||||||..|.||.||.||.|||||.
RBAM_031120__ 527 CCGAAATGAACGTCATTACCCGACTGATGGGGCTGATTTTGGCGGTGGTG 576
BSNT_05120___ 577 GCGGTCGGGATGATTGGTGCGGGGCTGAAAGGCATGTTTCCGATCTTAAC 626
|||.||||.|||||.||.||.||.||||||||||||||.|||||.||...
RBAM_031120__ 577 GCGATCGGCATGATCGGCGCCGGTCTGAAAGGCATGTTCCCGATATTGGT 626
BSNT_05120___ 627 CTCATGA 633
.||.|||
RBAM_031120__ 627 TTCCTGA 633
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