Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05116 and RBAM_031090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:35
# Commandline: needle
# -asequence dna-align/BSNT_05116___opuCB.1.9828.seq
# -bsequence dna-align/RBAM_031090___opuCB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05116___opuCB-RBAM_031090___opuCB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05116___opuCB-RBAM_031090___opuCB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05116___opuCB
# 2: RBAM_031090___opuCB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 654
# Identity: 536/654 (82.0%)
# Similarity: 536/654 (82.0%)
# Gaps: 0/654 ( 0.0%)
# Score: 2208.0
#
#
#=======================================
BSNT_05116___ 1 ATGAATCAAATGATGACTTTTTTGCAAACGAACGGCGGAGAGCTGCTGTA 50
||||||.|||||||.|..||||||||.||||||||||||||.|||.|.||
RBAM_031090__ 1 ATGAATGAAATGATCAAGTTTTTGCAGACGAACGGCGGAGAACTGTTATA 50
BSNT_05116___ 51 TAAAACAGGAGAGCATTTATATATTTCACTCATAGCCGTTGTATTGGGCA 100
||||||..|.|||||||||||.|||||..||||.|||||..||||.||||
RBAM_031090__ 51 TAAAACGTGGGAGCATTTATACATTTCGATCATCGCCGTCATATTAGGCA 100
BSNT_05116___ 101 TTATCGTTGCAGTGCCGCTCGGCGTTGCTCTTACCAGAATGAAAAAAGGC 150
||.||||.||.||.||||||||.||.||.||.||.|||||||||||.|||
RBAM_031090__ 101 TTGTCGTCGCCGTTCCGCTCGGAGTGGCGCTGACGAGAATGAAAAAGGGC 150
BSNT_05116___ 151 GCAGGTGCGGTAATCGGTTTCGTAAACATTGTGCAAACCCTGCCGAGTCT 200
|||||.||.||.|||||...|||.|||||||||||.|||.||||||||||
RBAM_031090__ 151 GCAGGCGCCGTCATCGGCGCCGTCAACATTGTGCAGACCTTGCCGAGTCT 200
BSNT_05116___ 201 GGCGATTTTAGCCTTTTTTATTCCGCTTCTCGGCGTAGGAAAAGTGCCTG 250
.|||||..|.||.||||||||.|||||..|.|||||.|||||.|||||.|
RBAM_031090__ 201 CGCGATACTGGCGTTTTTTATCCCGCTGTTAGGCGTGGGAAAGGTGCCCG 250
BSNT_05116___ 251 CGATTGTCGCTTTATTTTTCTATTCGGTGCTGCCGATCCTGCGCAATACG 300
||||.|||||..|.|||||||||||||||||||||||.||..|.||.|||
RBAM_031090__ 251 CGATCGTCGCGCTGTTTTTCTATTCGGTGCTGCCGATTCTCAGGAACACG 300
BSNT_05116___ 301 TATACCGGCATTAAAGGTGTAAATAAAAACCTCCTGGAATCGGGGAAAGG 350
||||||||||||.||||.|||||.|||||.||.|||||||||||.|||||
RBAM_031090__ 301 TATACCGGCATTCAAGGCGTAAACAAAAATCTGCTGGAATCGGGAAAAGG 350
BSNT_05116___ 351 GATTGGCATGACCGGCTGGGAGCAGATTCGGCTCGTTGAAATCCCGCTGG 400
.||.||||||||.|.||||||||||||..||||.||.|||.|.|||||.|
RBAM_031090__ 351 CATCGGCATGACGGTCTGGGAGCAGATCAGGCTTGTGGAACTGCCGCTTG 400
BSNT_05116___ 401 CGATTCCCATCATCATGGCGGGGATCCGCACATCAACGATCTATCTAATT 450
||.||||..|.|||||||||||.|||||.|||||.||.||.|||||.||.
RBAM_031090__ 401 CGGTTCCGGTGATCATGGCGGGCATCCGTACATCCACCATTTATCTGATC 450
BSNT_05116___ 451 GGCTGGGCGACACTTGCGTCGTTTATCGGGGGAGGCGGCCTCGGGGACTA 500
|||||||||||.|||||.||.|||||||||||.|||||.|||||.|||||
RBAM_031090__ 451 GGCTGGGCGACGCTTGCTTCCTTTATCGGGGGCGGCGGGCTCGGAGACTA 500
BSNT_05116___ 501 TATTTTTATCGGACTGAACCTATACCAGCCTGAATATATCATTGGCGGTG 550
||||||||||||.|||||.||.||.||||||||||||||.||.|||||.|
RBAM_031090__ 501 TATTTTTATCGGCCTGAATCTCTATCAGCCTGAATATATTATCGGCGGCG 550
BSNT_05116___ 551 CCGTGCCTGTCACAATTCTGGCAATTATTATTGATTATGTGCTGGCTGTG 600
|||||||.|||||.|||.|.||.|||||.|||||||||.||||.||.|.|
RBAM_031090__ 551 CCGTGCCGGTCACCATTTTAGCCATTATCATTGATTATCTGCTAGCGGCG 600
BSNT_05116___ 601 ACAGAACGAAAGGTGACGCCGAAAGGCTTGCAAGGGATGAAGGAAGTTTC 650
||.|||||.|||||||||||||||||..||.||||..||||||||||.||
RBAM_031090__ 601 ACGGAACGGAAGGTGACGCCGAAAGGGCTGAAAGGACTGAAGGAAGTATC 650
BSNT_05116___ 651 GTAA 654
.|||
RBAM_031090__ 651 ATAA 654
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