Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05114 and RBAM_031070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:35
# Commandline: needle
# -asequence dna-align/BSNT_05114___opuCD.1.9828.seq
# -bsequence dna-align/RBAM_031070___opuCD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05114___opuCD-RBAM_031070___opuCD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05114___opuCD-RBAM_031070___opuCD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05114___opuCD
# 2: RBAM_031070___opuCD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 678
# Identity: 551/678 (81.3%)
# Similarity: 551/678 (81.3%)
# Gaps: 6/678 ( 0.9%)
# Score: 2230.0
#
#
#=======================================
BSNT_05114___ 1 ATGGAAGTACTACAGCAGCTTGGCACATACTATTCGCAAAACGGCGGTTA 50
||||||||.||.||||||||.|||||.||.|||||.||||||||||..||
RBAM_031070__ 1 ATGGAAGTGCTGCAGCAGCTCGGCACTTATTATTCTCAAAACGGCGCCTA 50
BSNT_05114___ 51 TGTGCTGCAGGAGTTTTACCGCCATTTTCTGATGTCGGTATACGGCGTTT 100
||||||.|||||||||||||||||||||||.|||||||||||||||||||
RBAM_031070__ 51 TGTGCTTCAGGAGTTTTACCGCCATTTTCTCATGTCGGTATACGGCGTTT 100
BSNT_05114___ 101 TATTTGCCGCCATTGTTGGAATTCCGCTCGGCATCCTGATAGCCAGATAC 150
|||||||.||.||.||.||..|.||||||||||||.|.||.|||||..||
RBAM_031070__ 101 TATTTGCGGCGATCGTCGGTGTCCCGCTCGGCATCTTCATTGCCAGGCAC 150
BSNT_05114___ 151 AGAAGATTAAGCGGATGGGTTTTTGCGGTCACGAACGTCATTCAGACGAT 200
||||.|||||||||.|||||.||.|||||.||.|||||.||||||||..|
RBAM_031070__ 151 AGAACATTAAGCGGCTGGGTATTCGCGGTGACAAACGTGATTCAGACCGT 200
BSNT_05114___ 201 CCCGGCTCTCGCCATGCTTGCCGTGCTGATGCTTGTCATGGGGCTGGGCG 250
.|||||.||.||.||||||||.|||||||||||.|||||||||||.||||
RBAM_031070__ 201 GCCGGCGCTTGCGATGCTTGCGGTGCTGATGCTCGTCATGGGGCTCGGCG 250
BSNT_05114___ 251 CTAATACGGTGATATTGTCATTATTTCTGTATTCTCTTCTGCCGATTATC 300
|.|||||||||||||||||..|.|||.|.|||||.|||||.|||||.|||
RBAM_031070__ 251 CCAATACGGTGATATTGTCGCTGTTTTTATATTCGCTTCTTCCGATCATC 300
BSNT_05114___ 301 AGAAATACGTATACAGGGATTATCAGTATTGAGCACGCCTATCTTGAATC 350
.|.||||||||.||.||.||...|||.|||||.|||||.|||||||||||
RBAM_031070__ 301 CGGAATACGTACACGGGAATCGCCAGCATTGAACACGCTTATCTTGAATC 350
BSNT_05114___ 351 CGGAAAAGCAATGGGGATGACAAAATTTCAAGTGCTGCGGATGGTCGAGC 400
.||||||||.|||||.|||||.||||||||.|||||.||.|||||.||||
RBAM_031070__ 351 GGGAAAAGCGATGGGCATGACCAAATTTCAGGTGCTCCGCATGGTGGAGC 400
BSNT_05114___ 401 TTCCGCTTGCGCTTTCGGTCATAATGGCCGGCCTGCGCACCGCGCTTGTC 450
|.||||||||||||||.|||||.|||||.||.|||||.||.|||||.|||
RBAM_031070__ 401 TGCCGCTTGCGCTTTCCGTCATCATGGCGGGGCTGCGGACGGCGCTCGTC 450
BSNT_05114___ 451 ATTGCCATCGGCATTACGGCCATCGGGACATTTGTCGGTGCAGGCGGTCT 500
||.||.||||||||||||||.|||||.||.||||||||.||.|||||.||
RBAM_031070__ 451 ATCGCGATCGGCATTACGGCAATCGGAACGTTTGTCGGCGCGGGCGGACT 500
BSNT_05114___ 501 CGGGGACATCATCGTCAGGGGATCAAACGCCACAAACGGAACCGCGATTA 550
|||.|||||.||.||||||||.|||||||||||.||||||||||||||||
RBAM_031070__ 501 CGGTGACATTATTGTCAGGGGCTCAAACGCCACGAACGGAACCGCGATTA 550
BSNT_05114___ 551 TATTAGCGGGAGCGATCCCCACAGCTCTGATGGCGGTGATTGCCGATTTG 600
|.||.||.||.||.||.||.|||||.||||||||.||.||.||.|||.|.
RBAM_031070__ 551 TTTTGGCCGGCGCCATTCCGACAGCGCTGATGGCCGTTATCGCAGATCTT 600
BSNT_05114___ 601 GTCATGGGCTGGCTTGAACGAGCATTAAGCCCGATTAAAAAGAGAAAGAA 650
||.||||..|||||.||.||.||..|.||.|||.|.|.||||| |||.|.
RBAM_031070__ 601 GTGATGGCATGGCTGGAGCGGGCGCTGAGTCCGGTGAGAAAGA-AAAAAC 649
BSNT_05114___ 651 GAA--AAATCTGGCAG-GTGCCGCATAA 675
||| |||.| ||.| .|||.||||.|
RBAM_031070__ 650 GAACCAAAGC--GCCGAATGCGGCATGA 675
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